KEGG   Dendrobium officinale: 110100303Help
Entry
110100303         CDS       T05027                                 

Definition
(RefSeq) DNA ligase 4 isoform X1
  KO
K10777  
DNA ligase 4 [EC:6.5.1.1]
Organism
dct  Dendrobium officinale
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:dct00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    110100303
Enzymes [BR:dct01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     110100303
DNA repair and recombination proteins [BR:dct03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     110100303
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
LinkDB All DBs
Position
Unknown
AA seq 1113 aa AA seqDB search
MTDSTVRFGLLCSMFEAMGRDRSAVKKRNRFRTFLERVYTGRDYFSAIRLILPSLDRERG
TYGLKESALAAALVDALAISKDSEDALRLINWRKGGARTGANVGNFALVAADILQRRQGS
ASGGLTIREVNDALDQLSLREGRGDKAAVLSGLIKKTNAVEMKWILMIILKDLKLGISEK
SIFHEFHPDAEDLFNVTCDLKLVCEKLKDKGQRHKRQDIEVGKAVRPQLAMRISDATTAW
KKFHGKQIVAECKFDGDRIQIHRNGKDIHFYSRNFLDHTEYLHGMSDAILQNILVDRIIL
DGEMLVWDTSTNRFAEFGSNQEIAKAAIQGLQGDRQLCYVAFDILYAGDTSVIHQSLTER
HELLQKVVKPLRGRLEILVPSDGLNVRCPVGQPCWSIIVNCVEDVEKFFKETVENRDEGI
VLKDLSSKWEPGDRSGKWLKLKPDYIHAGADLDVLIIGGYFGSGRHGGEVAQFLLGLAER
SDSGSFPKRFLSFCRVGSGLSDDDLDILITRLKPYLRKNEYPKRVPHFYEVTNNSKERPD
VWVESPDKSVILSITSDIRTIKSEVFAAPYSLRFPRIQRVRYDKQWHECLDVESFRDLVQ
SSNGTTQRGVNQGALQLVNAKPKRLSRKGEKTTISVITPQSIQSDISVVKKTLIFANMMF
CILAINFVNVPPSSSVDYFHKLVIENGGNFSMNLNDTVTHCIAAEKKGIKYQAAMHHGDI
IHYSWVLDCCNKKKLVHIQPKYFLFFADSSKKKHQEEIDAFSDYYYWDIDIEDIKQIFCN
MIGSGKSKMIENYRKKYLPVRRLGLFHGCFIYLHEMPVRNTDLKVISELAVRRMKLEINM
HGGNVCNDLETATHLLVYAVLGSHDFDEILESIPSNQRRLLHQKKLYVLVHNWLEDSLDK
SVRLPENDYNLKPDSLEELIVEEKSNPAFPAIKCEAEDQNSAASGKRKRGRRAAGRANVG
RPVHRPTRRTRPKIGKRSVKLGSDGSESSDCLEAAPSKHAKDENLTGQVQKTASEIQDEA
ERKQEVSDRPVEQSDSMKFLEIGSKSGDKLEVRTDPIHAMLLDMIPSLSQTQKRHREDVD
VSINEDKKPQQETNPVKKKVSYKKAADELLKDW
NT seq 3342 nt NT seq  +upstreamnt  +downstreamnt
atgacggactccacggtacgcttcggcctgctgtgcagcatgttcgaggcgatgggccgg
gaccggtcggcggtgaagaagcggaaccggtttcggacatttttggaaagggtctacacc
ggccgggactacttcagtgctatacgccttatcctcccttccctcgatcgcgagcgcggt
acttacggccttaaggagtccgctctcgcagccgcgctggtggatgccctcgccatatcc
aaggactccgaagatgccctccgtcttatcaactggcgcaagggcggggcgcgcaccgga
gccaacgttggaaacttcgcactcgttgccgccgatattttgcagcggaggcagggttcg
gcttccggagggctcacgatcagagaggtgaacgacgcgcttgatcagctttcattgagg
gagggcaggggagacaaagctgcggtcctttcaggtctcattaagaaaacaaatgcagtg
gaaatgaaatggattctaatgatcatactaaaagatttgaagctgggaattagtgagaag
agtatttttcatgagtttcatccagatgctgaagaccttttcaatgtgacttgtgacctt
aagcttgtttgtgaaaagttgaaagataagggtcaacggcataaacgacaggatatagaa
gtggggaaagctgttaggcctcagctggctatgcggattagtgatgctactactgcatgg
aagaagttccatggtaagcagattgttgcagagtgcaaatttgacggtgatcgcattcaa
atccacagaaatggaaaagatatacacttctattctcggaattttctggaccatacagaa
tatttacatggaatgtctgatgctattttgcaaaacattttggttgacaggattatacta
gacggtgagatgctggtttgggatacttccaccaatcgctttgctgagtttggttcgaac
caggaaatagcgaaggcagcaatacagggattacagggtgataggcagttatgttatgtt
gcttttgatatactgtacgctggagacactagtgttattcaccagagtttgactgaacga
catgaactgcttcagaaagttgtaaaaccattaaggggtcgcttagaaattttggtgccc
agtgatggtcttaatgtacgctgtcccgttggtcagccatgctggtctattattgtcaat
tgtgtggaagacgttgagaagtttttcaaagaaacagttgaaaacagagatgaggggatt
gtgctgaaagatcttagttcaaaatgggaacctggtgaccgaagtgggaaatggttgaag
ttgaagcctgattacatacatgctggtgctgatcttgatgttcttattataggtggttat
tttggctctggtcgtcatggcggagaggtggctcagtttctgcttggtctggcggagcgc
tctgattctggaagtttccccaaaaggttcctttctttctgtcgagtgggttctggtctt
tcagatgatgatcttgatattctcattacgagattgaagccctacttaaggaagaatgaa
taccctaaaagagtaccacatttctatgaagtaacaaataattcaaaagagagaccagat
gtttgggttgagagccctgataagtcagtcatactctctattaccagtgatatcagaaca
ataaaatctgaggtttttgctgcaccctacagtttgaggtttccacgcatacaacgtgtg
agatatgacaagcaatggcatgagtgccttgatgttgaatcatttagggatttggtgcag
tcaagcaatggcactacgcaaaggggagtaaatcaaggagctttgcaactcgttaatgcc
aagcctaaaagattatcaaggaagggagagaaaacaaccatttctgtcattacaccccag
tctatccagtctgacatctctgttgtaaagaaaacgttgatatttgcaaatatgatgttc
tgtatccttgcgataaattttgtgaatgttcccccatcttcttcagtagattatttccac
aaactagtgattgagaatggaggaaatttttccatgaatcttaatgatacagtaactcat
tgcattgcagctgagaaaaaaggcatcaaatatcaggcggccatgcatcatggtgatatc
atccattattcttgggttttggactgttgcaataagaagaaattagtgcatatacaaccc
aagtacttcttgttttttgctgattcttccaagaagaagcaccaagaggagattgatgca
ttctctgattattattactgggacattgacatcgaagacataaaacagatattttgcaat
atgattggatctggaaagtccaaaatgattgagaattacaggaagaaatatcttccagtg
agaagattgggcttgtttcacggttgtttcatttacttgcatgaaatgcctgtcaggaat
accgacttaaaagttatatcagagctggccgtaagaaggatgaaacttgaaattaacatg
cacgggggtaatgtttgcaacgatcttgaaactgcgacacatttattagtttatgcagtg
cttggatcacatgactttgatgagatacttgaaagcattccatcaaatcaacgccgcctt
ttacaccagaagaaattatatgttttggtacataattggttagaagattccttggataaa
agtgtcaggttacctgaaaatgattataatctaaagccagattcattggaagaactgata
gttgaggaaaaaagcaatccggccttcccagcaatcaaatgtgaagctgaagatcaaaac
tctgctgcatctggaaagagaaaaagagggagacgagctgcaggaagagctaatgttgga
agaccagttcacagacctacccgtcgaacgcggccgaagattgggaagcgttcagtaaag
ctgggttcggatggttctgaaagcagtgactgtttggaagcagctccatcaaaacatgcc
aaagatgaaaatttaactggccaagtccagaaaactgcaagtgaaatacaagatgaagct
gaaaggaaacaagaagtttcagataggcctgtagaacaaagtgattctatgaaatttctg
gaaattggaagtaagtcgggagataaattggaggtaaggactgacccaattcatgcaatg
ctgttagatatgataccaagtcttagccaaacccagaaaaggcatcgagaagatgttgac
gtttctatcaatgaggataagaaaccacagcaggagacgaatccagtgaagaagaaagta
agctacaaaaaagctgcagatgagcttcttaaagattggtga

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