Dickeya parazeae: Dd586_3466
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Entry
Dd586_3466 CDS
T01138
Name
(GenBank) Rhs element Vgr protein
Organism
ddc
Dickeya parazeae
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Gene cluster
GFIT
Motif
Pfam:
Phage_base_V
Phage_GPD
DUF2345
DUF6484
Sarcoglycan_1
DUF3540
Motif
Other DBs
NCBI-ProteinID:
ACZ78296
UniProt:
D2BWE3
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Position
3953732..3955522
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AA seq
596 aa
AA seq
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MADSPATHHDGVVTYTIKSNGTEIGNAIQVLSLHVCKRVNHIARAELVIEDGDMPQNRFP
LSSGSLFKPGNTLTIAAGYASQEQVLFEGMIIRHGIRLGGAGHSRLIIECRDSAIGMTVA
RRNNNYLKKKDSDILRQLIGGCAGLTARVDTTTTQHDELVQFNCTDWDFLLTRAEANGLV
VCNDDNTVAVTAPCLSASPVLTLTYGDDLMSLTADIDARYQFSSVTGVGWDIKNQQPIQE
NAAAQSVSQQGNLSADELARVLGLTAFRLQSATPLPASALRDWASGQQVKSALSRLRGTL
TCQGSARARINTLIELAGVGTRFNGHLYVSGVRHHIQDGQWLTHIDFGMPPVWSAEHRDL
TPPPAAGLLPGVDGLQIGIVKKLDGDPQQQHRVQVSLPVTQAENDGLWARLASYYASSGI
GAQFMPEVGDEVILGYFNNNPSDPVILGSLYSSKNPPPVIPEAKNTLKTLMTRSQLTLQF
NEEDKSITLTTPGGNQVMLSDKDKTVTLQDQNGNSVTLDASGITLDSPKNITLSAKGKIE
LSAGRTVDISAKADVTAEGMNVNLSAKTGLTAKGNATAELSASGQTTVKGGIVMIN
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggcggactccccggcaacacaccatgacggcgtggtgacctacaccatcaagagcaac
ggcaccgagatcggtaacgctatccaggtgttatccctccatgtctgtaaacgggtgaac
catatcgcccgcgcagaactggtgattgaggatggcgacatgccgcaaaatcgctttccg
ctcagtagcggctcgctgttcaaaccgggtaacacgctgactatcgccgccggttacgcc
agccaggaacaggtgttgttcgagggcatgatcattcgccacggcatccgcctcggtggg
gcgggtcattcacggctgatcatcgaatgccgggacagcgctatcggcatgacggtcgcg
cgccgcaacaacaactacctcaagaagaaagacagcgacatcttacgccagttgattggc
ggctgcgccgggcttaccgcccgtgtcgacaccacaaccacccagcacgacgagctggtg
cagttcaactgcaccgactgggattttttgctgacccgagcggaagccaacgggctggtg
gtctgcaacgacgataatacggtagcggtcaccgcgccctgtctgagcgcgtcgccggtg
ttgaccctcacctacggcgacgacctgatgtcactgaccgccgatatcgacgcccgttat
cagttcagctcggtcaccggcgttggctgggatatcaaaaaccagcagccgatacaggaa
aacgccgccgcgcagtccgtcagccagcaaggcaacctcagtgccgatgagttggcccgc
gtactggggctgaccgcgttccggctgcaaagcgccacgccactgccagccagcgccctg
cgggactgggcgagcggccagcaggtaaaatccgccctctcccgcctgcgcggcacgctg
acctgtcagggcagcgcccgtgcacgcatcaacacgctgattgaactggctggcgtcggc
acgcgttttaacggccacctctatgtcagcggcgttcgccaccatattcaggatgggcag
tggctgacccacatcgatttcggtatgccgccggtctggtcggccgagcaccgggatctc
acgccgccgcctgccgccggtctgctgccgggcgtggatggcttgcaaataggcatcgtc
aaaaagctcgatggcgacccacaacagcaacaccgcgttcaggtatcgctaccggtgacg
caggcggaaaacgatggcttgtgggcgcggctggccagttattacgcctcatccggcatc
ggggcgcagtttatgccggaggtgggcgacgaggtgatactgggttacttcaacaataac
ccgtccgacccggtgatcctcggcagcctgtacagcagcaagaacccaccgccggtcata
ccggaagccaaaaacaccctcaaaacgctgatgacccgcagccagttaacgttgcagttc
aacgaagaggacaagtccatcaccctgacgacccccggcggcaatcaggtgatgttgagc
gacaaagacaaaacggtgacgttacaagatcagaacggcaacagcgtcacgctggatgcg
tctggtatcacgctcgacagcccgaagaacatcaccctcagtgccaaagggaaaatcgaa
ctcagcgccgggcgcaccgtggatatcagcgccaaagccgacgtcaccgccgaggggatg
aacgtcaacctgtcggccaaaaccggcctgaccgccaaaggcaacgccaccgccgaactg
tcggcctccggccaaaccaccgtgaaaggcggcatcgtgatgatcaactag
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