Dickeya dadantii 3937: Dda3937_02955
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Entry
Dda3937_02955 CDS
T01305
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
ddd
Dickeya dadantii 3937
Brite
KEGG Orthology (KO) [BR:
ddd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ddd03009
]
Dda3937_02955 (dbpA)
Enzymes [BR:
ddd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Dda3937_02955 (dbpA)
Ribosome biogenesis [BR:
ddd03009
]
Prokaryotic type
rRNA helicases
Dda3937_02955 (dbpA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Helicase_C_2
CMS1
YlmH_RBD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ADM98551
UniProt:
E0SCM7
LinkDB
All DBs
Position
complement(2492277..2493650)
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AA seq
457 aa
AA seq
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MTSFAELNVLPAEQLTTLNELGYLTMTPIQAAALPAILAGKDVRAQAKTGSGKTAAFGLG
LLQQLDAGQFNTQSLVLCPTRELADQVANELRRLARYLPNIKVLTLCGGVPFSIQRDSLI
HAPHIIVATPGRLLDHLKKETVSLDALQTLVLDEADRMLDMGFADAIDEVIAHVPAQRQT
LLFSATWPDAIAAISHRIQRDPLTIAIDTVDELPAIEQQFYEVSRSGKIDLLQKLLSREQ
PASCVVFCNTKKDCQAVYDALTDSNQSVLALHGDMEQRDRDQTLVRFANGSSRVLVATDV
AARGLDIKALEMVINYELSWDPEVHIHRIGRTARAGESGLAISLCAPEEAQRANALEEML
NMKLNWHSLPTGLRITPLEATMATLCIDGGKKAKMRPGDILGALTGDMGLDGADIGKITI
HPMHAYVAVKQSVARHAWKQLQQGKIKGKAVKVRLLK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
gtgacctcatttgctgaacttaacgtgcttcctgcggaacaactcaccacccttaacgag
ctgggctacctgaccatgaccccgattcaggccgcggcgttaccagcgatcctcgccggt
aaagatgtccgcgcgcaggcgaaaaccggcagcggcaaaaccgcggctttcgggctgggc
ctgttgcagcagttggatgccgggcagttcaacacccagtcgctggtgctgtgcccgaca
cgcgaactcgccgatcaggtcgccaatgaactgcgccggctggcgcgctacctgccgaac
atcaaggtgctgacgctgtgcggcggtgtgccgttcagtatccagcgtgactcgctgatc
catgctcctcacatcattgtcgccacgccgggccgactgctggatcacctgaaaaaggag
acggtaagccttgatgccctgcagacgctggtgctggatgaagctgaccggatgctcgat
atgggttttgccgatgccattgatgaggttatcgcccacgtgcccgctcagcgtcaaacg
ctgctgttttccgccacctggccggatgccattgccgccattagccaccgtattcagcgc
gatccgctgaccatcgcaatcgacacggtggatgaactgccggcgattgaacagcagttc
tatgaagtttcccgcagcggtaaaatcgatctgctgcaaaagctgctcagccgcgaacaa
ccggcttcctgcgtggtgttctgcaataccaaaaaagattgtcaggcggtatacgatgcc
ctgactgacagtaaccagagcgtgctggcgctgcacggcgacatggagcagcgtgaccgc
gaccagacgctggtgcgcttcgctaacggcagcagccgcgtgctggtggcaaccgatgtt
gccgcgcgtgggttggatatcaaagcgctggagatggtgattaactacgagctgtcgtgg
gatcccgaggtgcatattcaccgcatcggccgtaccgcccgcgccggtgaaagcgggctg
gccatcagtctctgcgcgccggaagaggcccagcgtgccaatgcgctggaagagatgctg
aatatgaaactcaattggcattcgctgccgaccggattacgcatcaccccgctggaagcg
acgatggcgacgctgtgcatcgacggcggcaagaaagccaaaatgcgtcccggcgatatt
ctgggcgcgttaaccggcgacatggggctggatggcgcggatatcggtaagattacgatt
catccgatgcacgcctatgtagcggtgaagcagtcggtggcgcgccacgcgtggaagcag
ttgcagcaggggaaaattaaagggaaggcggtgaaggtcaggttgctgaaataa
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