Dictyostelium discoideum (cellular slime mold): DDB_G0269924
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Entry
DDB_G0269924 CDS
T00245
Symbol
vps18
Name
(RefSeq) 7-fold repeat in clathrin and VPS proteins repeat-containing protein
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
DDB_G0269924 (vps18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ddi04131
]
DDB_G0269924 (vps18)
Membrane trafficking [BR:
ddi04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
DDB_G0269924 (vps18)
Hops complex
DDB_G0269924 (vps18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_5
zf-C3HC4_2
zf-RING_16
Tektin
zf-RING_2
zf-RING_11
zf-C3H2C3
zf-ANAPC11
Vps39_2
DUF2175
zf-RING_UBOX
zf-C3HC4
NOG1_N
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
8617365
NCBI-ProteinID:
XP_646408
dictyBase:
DDB_G0269924
UniProt:
Q55CS3
LinkDB
All DBs
Position
1:3875953..3879788
Genome browser
AA seq
1077 aa
AA seq
DB search
MNLNFNSTQLMNENFNDGDYSGYNNGGMMMNNNNNNNHNNHNNNHNSGMNDMRNQIEDRI
FELEKIEYNKDGITSIVVNNGKMAMTTRNNYIIRLDLADSIPYEIKMNSDIYKIFCDPTG
NHMVICMTNEEIYYLHTQSTSRKPKQLKIKVDLIESIAWDPAGDKNNVQTILIGTNKGKV
YETVVSGVEKGYFEYLGGNAPILKLLHTFDDFEPVMGMSLERVQNKNFLMVSTPTRLYHL
IAQIGSYEQLFDRYHISFDIVPEEGIPNEACGQLKFFSKSHLSLPQSYGWLVSTGIRYGD
LIYGAQNPGDKFTNSPSMLFFKADQDNLNTNNTIGGGGSSNNSSSNNSNNNTPKGGNSGT
NTPNHYQQLQSFQPALPPIPPVSFALSQFHFLLAYEDRFIALSKLNYQIVYEQDFRGRGT
RLHSIAIDNTERTIWLCGDNALYELKITDEDRDAWRLYMEKGQFDMALAYAKEPYLPEKR
DKIWQTQAEHYFKEERYELSATFFGKTHKVFEEITLKFINVGQRDALKTYLLQKLTNLSR
GQETQKTIICTWLIEIFISKLNTLRDVSNKDRYNKVNSEFRQFLENFKDTLIIIKDITFN
IISSHGAIEELLFYANLIEDYERVISYHIQHQQYEKALSILTTLDKPKPPPSSQQQQQQP
QKNNRLGVTNVQQPEPDELYYKFCPILFHFIPYQTCEAWIQTKAGFLDPKKLIPSLMRYD
HSKTPPGQPNQAIRYLQYCVNKQGNTDRPVHNYLLSLYVKQEEDGPLSDFLNDGVHFDLK
YALRLCMREKKLKACVYIYSAMELFEEAVDLALLVDIDLAKENADKVRDTDEELCKKLWL
RIAEHQVKKDGNIKEAMEFLKACSLLKIEDILPFFPNFTVIDDFKEEICKSLEDYNSYID
ELKAAMDDATKSAQQIRKDIQNLRNKYGHVRGDQKCDICNYPVLTKRFYLFSCKHVFHSD
CLITQLMKHLSPMQKQRIRELEMNIGHNHIDLLSQGAQNNQNPVISNISSILGNISGGAN
QAQGDENENVSQEDLDRNELDRMVGKECLYCGDIMIRSIEQPFIGLDEIETLESWEI
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaatttcaattctacccaattaatgaatgagaatttcaatgatggagattat
agcggatacaataatggaggtatgatgatgaataataataataataataatcataataat
cataataataatcataatagtggaatgaatgatatgagaaatcaaattgaggatagaata
tttgaattagagaaaattgaatataataaagatggtatcacatcaattgtagtaaataat
ggtaaaatggcaatgacaacaagaaataattatatcattcgtttggatttagctgattct
ataccctatgaaattaaaatgaatagtgatatttataaaatattttgtgatcctacaggt
aatcatatggttatttgtatgacaaatgaagagatttattatttacatacacaatcaaca
tcaagaaaaccaaaacaattaaagattaaagtcgatttaattgaatcaattgcatgggat
ccagctggtgataaaaataatgttcaaacaattttaattggtacaaataaaggtaaagtc
tatgaaactgttgttagtggtgttgaaaaaggttatttcgaatatcttggtggtaatgcc
ccaattttaaaattgttacatacatttgatgattttgaaccagtgatgggaatgagctta
gaaagagttcaaaataaaaactttttaatggtatcaacaccaactagattatatcattta
atagcacaaattggatcatatgaacaattattcgatagatatcatatttcatttgatatt
gtgccagaggaaggtataccaaatgaagcatgtggtcaacttaaattcttttcaaaatca
catttgtcattgccacaatcatatggttggttagtatcaactggtatacgttatggtgat
ttaatttatggtgcacaaaatcctggtgataaatttacaaattcaccatcaatgttattt
tttaaagcagatcaagataatttaaataccaataatactattggtggtggtggtagtagc
aataatagtagtagtaataattcaaataataatacaccaaaaggtggtaatagtggaaca
aatacaccaaatcattatcaacaattacaatcatttcaaccagcattaccaccaatacca
ccagtatcatttgcattaagtcaattccatttcttattggcatatgaagatagattcatt
gcattaagtaaattaaattatcaaatcgtttatgaacaagattttcgtggtagaggtaca
agattacattcgatagcaattgataataccgagagaaccatttggttatgtggtgataat
gctttgtatgaattgaaaatcaccgatgaagatagagacgcttggagactttatatggag
aaaggtcaattcgatatggctttagcatatgccaaagaaccatatctcccagagaaacgt
gataaaatttggcaaactcaagctgaacattatttcaaagaggagcgttatgaattatcc
gctacattctttggtaaaactcataaggttttcgaggagatcacattgaaattcatcaat
gtgggtcagcgtgatgctttgaaaacttatttacttcaaaagttaaccaatctcagtaga
ggtcaagaaactcaaaaaactatcatttgcacttggttaattgaaatattcattagtaaa
ttgaataccctacgtgatgtctccaataaagataggtacaataaggtcaattcagaattt
cgtcaattcttggagaatttcaaagatacactcatcattattaaagatatcacattcaat
attatcagtagtcatggtgcaattgaagaattacttttctatgcaaatttaattgaagat
tatgaacgtgtaattagttatcatattcaacatcaacaatatgaaaaagctttatcaatt
ttaacaacattggataaaccaaaaccaccaccatcatcacaacagcaacaacaacagcca
caaaaaaacaatagattaggtgtaacaaatgtacaacaaccagaaccagatgaattgtat
tataaattttgtccaattttattccatttcataccatatcaaacttgtgaagcatggatt
caaactaaagcaggatttttagatccaaagaaattaattccttcattgatgagatatgat
cattcaaaaacaccaccaggtcaaccaaatcaagcaattcgttacttacaatattgtgta
aacaaacaaggtaataccgatcgtccagttcataattatttactctcactctatgtcaaa
caagaggaggatggtccattatcagactttttaaatgatggtgtccatttcgatttgaaa
tatgctttacgtctttgtatgagagaaaaaaagttaaaagcatgtgtctacatttatagt
gcaatggaattattcgaagaggccgttgatttggcattattggtcgatattgatttagca
aaagagaatgccgataaagttagagataccgatgaagaattatgtaaaaaactttggtta
cgtattgctgaacatcaagtaaagaaagatggtaatatcaaagaggcaatggaattctta
aaggcatgttcattattgaagattgaagatatcttaccattctttccaaatttcactgtt
atcgatgactttaaagaggaaatttgcaaatcattggaagattacaattcatatatcgat
gaattaaaggctgcaatggatgatgctacaaaatcggctcaacaaattcgtaaggatatt
caaaatctacgtaataaatatggtcatgttagaggcgatcaaaaatgtgatatctgtaat
tatccagttttaaccaaacgtttctatctcttctcttgtaaacatgttttccatagcgat
tgtttaatcactcaattgatgaaacatctctcaccaatgcaaaaacaaagaattagagag
ttggaaatgaatattggtcataatcatatcgatcttctttctcaaggcgctcaaaataat
caaaatcctgtaattagtaatatctcttctatacttggtaatatttcaggaggtgctaat
caagctcaaggtgatgaaaatgaaaatgtttctcaagaagacttggatcgtaatgaatta
gatagaatggttggtaaagaatgcttatattgtggtgatataatgattagatcaattgaa
caaccttttattggtttggatgaaattgaaactttagaatcttgggaaatttaa
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integrated database retrieval system
