KEGG   Dictyostelium discoideum (cellular slime mold): DDB_G0274587
Entry
DDB_G0274587      CDS       T00245                                 
Symbol
nup62
Name
(RefSeq) nuclear pore protein
  KO
K14306  nuclear pore complex protein Nup62
Organism
ddi  Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ddi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    DDB_G0274587 (nup62)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ddi03019]
    DDB_G0274587 (nup62)
Messenger RNA biogenesis [BR:ddi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     DDB_G0274587 (nup62)
SSDB
Motif
Pfam: Nucleoporin_FG Nsp1_C 7TMR-HDED
Other DBs
NCBI-GeneID: 8619338
NCBI-ProteinID: XP_643911
dictyBase: DDB_G0274587
UniProt: Q86IX4
LinkDB
Position
2:3866512..3868750
AA seq 709 aa
MSNNLFGTGSSTSSSLFGSTPSAGGLFGGGSSTTPATGGGGLFGGASTTPATGGGLFGGA
STTPATGGGLFGGASTTPATGGGGLFGGSSTTAPATGGGGLFGGSTTTAPATTGGLFGGS
STTAPSTTTGGLFGGSSTTTPSITTTGGLFGGASTTAPSTTTGGLFGATTPATTATTTTG
GLFGGSTTTPSLTSGGGLFGATTPAATTTTTSSAIPSLTSGGGLFGGSTTTPSLTSGGLF
GATTPAATTTTSTTTPSLTSGGLFGATTPSTTGGLFGASTTTTTTPSTTSTTTPSTTTGG
LFGATTPATTTTSGGLFGASTTTPSTTGGLFGVSTTTPSTTSATTPTTTTTGGLFGAATT
SATTPSTTTTTTTTTPTTGLFGSSTTPSTTTSGGLFGSSTTPSTTTTTTTATTPTTGGLF
GSSTTPSTTTTSGGLFGSSATPSTTSSGGLFGATTTSATTTTTTPTTTSGGLFGTSSTTT
TTTTPAAVAATSSNPLTTSMLGGSSTTPNPVSASLNNSDPIGINESKLLEQLLNEWVSEI
ENQTKNFYDQAKTIFVWDQRIMDNSQKLGKLMDVVVKLNSQQNALNQCIDVVRDQQALLE
RSLNALDSKIKSSPKDNETTADLERERIYSLATKIDDDIIKVENKLLGVVNKINQNQVKD
DNPKDLNQKVSKILNDHLNTLQWIDKSTNILQESLKVIESTSLPETSRR
NT seq 2130 nt   +upstreamnt  +downstreamnt
atgtcaaacaatttatttggtacaggttcatcaacttcatcatcattatttggttcaaca
ccttcagcaggtggattatttggtggtggtagttcaacaacaccagcaacaggcggtggt
ggtttatttggaggtgcctcaacaacaccagcaacaggcggcggtttatttggaggtgcc
tcaacaacaccagcaacaggtggtggtttatttggaggtgcctcaacaacaccagcaaca
ggtggtggtggtttatttggaggtagtagcactacagcaccagcaacaggtggtggtggt
ttatttggtggttctacaacaactgcaccagcaactactggaggattatttggaggtagt
agcactacagcaccatcaacaacaactggtggattattcggaggttcttcaacaactaca
ccatcaataacaacaacaggaggattatttggaggtgcttcaacaactgcaccatcaaca
acaacaggtggattatttggagcaactacaccagcaactacagcaacaacaacaacaggt
ggattatttggcggatctacaaccacaccatcattaacaagtggtggaggtttatttgga
gcaactacaccagcagctacaacaacaacaacatcctcagctataccatcattaactagc
ggcggaggtttatttggtggatctacaactacaccatcattaactagtggtggattattt
ggagcaactacaccagcagctacaacaactacatctacaactacaccatcattaactagt
ggtggattatttggagcaaccacaccatcaactacaggaggattatttggagcatcaaca
acaacaacaacaacaccatcaactacatctacaacaactccatcaacaactacaggcgga
ttattcggtgcaactacaccagcaacaactacaacttcaggaggattatttggagcatca
acaacaacaccatcaaccacaggaggattatttggagtgtcaacaacaacaccatcaact
acatcagcaaccacaccaacaacaacaactacaggaggattatttggcgcagcaacaaca
tcagcaactacaccatcaacaacaacaacaacaacaacaacaacaccaactactggatta
tttggttcatcaacaacaccatcaacaacaacatcaggtggattgtttggttcatcaact
actccatcaacaacaacaacaacaacaacagcaacaacaccaacaacaggcggattattt
ggttcatcaactactccatcaacaacaacaacatcaggtggattatttggttcatcagct
acaccatcaacaacatcatcaggtggattatttggagcaacaactacttcagcaacaacc
acaactactacaccaaccactacctctggtggattatttggaacatcatcaactaccacc
accactacaacaccagcagcagtagcagcaacttcatcaaatccactcacaacatcaatg
ttgggtggatcatcaacaacaccaaatccagtttcagcttctttaaataatagtgatcca
attggaattaatgaaagtaaattattagaacaactcttaaatgaatgggtatcagaaatt
gaaaatcaaactaaaaatttttatgatcaagcaaaaactatttttgtttgggatcaacgt
ataatggataattctcaaaaattaggtaaattaatggatgtagtagttaaattaaattct
caacaaaatgcattaaatcaatgtattgatgtagttagagatcaacaagcattattagag
agatcattgaatgctttagattcaaagattaaatcatcaccaaaggataatgaaacaaca
gcagatttagagagagaaagaatctattctttggcaactaaaatagatgatgatatcatt
aaagtagagaataaattattgggtgtagtaaataaaattaatcaaaatcaagttaaagat
gataatccaaaggatttaaatcaaaaagtttctaaaatcttaaatgatcacttaaatact
ttacaatggattgataaaagtacaaatattcttcaagaatctttaaaagtaatagaaagt
acttctttacctgaaacttcaagaagataa

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