Dictyostelium discoideum (cellular slime mold): DDB_G0277221
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Entry
DDB_G0277221 CDS
T00245
Symbol
chcA
Name
(RefSeq) clathrin heavy chain
KO
K04646
clathrin heavy chain
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
DDB_G0277221 (chcA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ddi04131
]
DDB_G0277221 (chcA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ddi04147
]
DDB_G0277221 (chcA)
Membrane trafficking [BR:
ddi04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
DDB_G0277221 (chcA)
Exosome [BR:
ddi04147
]
Exosomal proteins
Proteins found in most exosomes
DDB_G0277221 (chcA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
Coatomer_WDAD
HCNGP
Motif
Other DBs
NCBI-GeneID:
8620910
NCBI-ProteinID:
XP_642717
dictyBase:
DDB_G0277221
UniProt:
P25870
LinkDB
All DBs
Position
2:7717198..7722630
Genome browser
AA seq
1694 aa
AA seq
DB search
MTNLPIRFQEVLQLTNLGIGSNSIGFSTLTMESEKYICIRETTPDDKNNVVIIDTDNPSQ
ILRKQMKTDAAIMNPKEPILALKIGQVLQLISIEQKMQLKSCQMQEPLEFWKWISPNTLA
LVTATSVFHWTKEGNSDPVKVFDRHPDLQNTEIINYRSDSTQNWLVLVAIHQRDGRVVGR
IQLYSVEKQISQSIEGHAACFANYIVPGATRPSTLFAISSRTQNASKILVLEVSKGDGPN
FQKRASDVFYPPEIGASDFPVAMQVSEKYEVIYMVTKLGYIHLFDLGTANLIYRNRISNE
NIFVTAFEESTNGIIAVNRKGQVLSVSIDDKNIIPYICNTLNNLELAISMACKNNLPGAE
GLLTTQFERYFQQGQYKEAAKVAADSPGSILRNLQTIQKFQSIPPIPDQPSALLQYFGML
LEKGKLNKVESLELVRPVLAQGKKPILEKWLTEDKLECSEQLGDEVRPHDRKLALSIYYR
ANASDKVITLFAETGEFDKIIAYCKKFNYKPDFMFLLQRMANANPMGAADFAVKLVKEEG
GPYIDANQVVELFSARNMIQETSNFLFAILDGDRPQDANLQTKLLEINLLHAPQNADAIM
GGQKFTHYNRLRIGGLCEKAGLYQRALEHYTDLADIKRVLSHAGHMVNQEFLVSYFGSLN
PEDRMECMRDFLRTNPRQNLQLVVAIAVSYSDQITPEAIIAMFESFRLYEGLYLYLTQVV
VTSTSPEVHFKYIEAAAKINQFKEVERMCRDSNYYDPEKTRDFLKEAKLPDQLPLIIVCD
RYEFISDLTNYLYKNNLSKYIEAYVQKINPVNTPLVVGALLDLDCQEDYLRNLIMSVRNM
CPADSLVEQVEKRNRLKLLLPWLEARVAEGNIEPAIHNALAKIYIDSNKNPEAFLLHNQF
YDSKVVGKYCEKRDPYLSFVAYKRGLCDYELIEVTNKNTLFKNQARYLVERQDPDLWAYV
LSDQNEYKRSLIDQVVQTALPESTNATEVSATVKAFMDANLPNELIELLEKIVLEGKEFK
TAKELQNLLILTAIRADKSRVTDYINRLDNFDGSKLAPIAIESQLYEEAFFMYKKFQFNV
EAIDVLITHIGSIERAHDFAERCNQTEVYSKLGVAQLKAEMVKECIESFIKANDTEHYQE
VVAAAERKDEYEDLVKFLQMCRKKIKEPAIESELIFAYAKVNKLAEMEDFINSPNSAHIQ
VVGDRCFENGLYEAAKVLYTNISNFSRLTSCLVKLGQYQAAVDAARKANSTKTWKEVSAA
CIDAKEFRLAQVCGINIIVHGDELEELIRQYEDRGYFNELISLLESGLASERAHVGMFTE
LAILYSKYKEEKLMEHLKLFYSRLNVPKVIKACQANQQWPQLTYLYIHYDEHDNAIQTMI
NHSIEAWDHVLFKETIPKVAKLDLYYSAISFYLEEQPLLINDLLSVLSPRIDHTRAVTLI
RSLGHLPLVKPYLVSAQDQNVAALNEALNELYVEEEDYESLRSSIDANSNFGTIALAQKL
EKHELLEFRRIAAYLYKKNNRWAQSVELSKKDKLYKDAIQSASDSKNPAIGEELLQYFVD
QQNNSAFAACLYTCYDFLKPDAVIELAWRNNILNYSFPYLIQYVKEYTTKVDQLVDDFKA
RQKKTEEEKEQQNIESSQYQPDLTNLSYGYAATGGMLALPPAVGYQQQQQPQQMYNPNQM
MGGFQQNYNQYGGF
NT seq
5085 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatttaccaattagatttcaagaagttctccaacttacaaatttaggtattgga
tccaattcaattggtttttcaaccttaacaatggagagtgaaaaatacatttgtattcgt
gaaactacaccagatgataaaaataatgttgtaattattgatactgacaatccatcacaa
attcttagaaaacaaatgaaaacagatgctgcaattatgaatccaaaagaaccaatttta
gcattaaaaattggacaagttttacaattaatttcaattgaacaaaaaatgcaattaaaa
tcatgtcaaatgcaagaaccattagaattttggaaatggatatcaccaaatacattagca
ttagttacagcaacatctgtatttcattggacaaaagaaggtaattcagatccagttaaa
gtttttgatcgtcatccagatttacaaaatacagagattataaactatcgttcagatagc
acacaaaattggttagttttagtagcaattcatcaaagagatggacgtgtagttggtcgt
attcaattatactctgtagagaaacaaatcagtcaatccattgaaggtcatgcagcatgt
tttgccaactacattgtaccaggtgcaactagaccatcaacattgtttgcaatttcatca
cgtactcaaaatgcatcaaagatattggtattggaggttagtaaaggtgatggaccaaac
ttccaaaaacgtgcctctgacgttttctacccaccagagattggtgcttccgatttccca
gtggcaatgcaagtctctgaaaagtatgaagtcatctatatggtcactaaattgggttac
attcatctctttgatttgggtacagcaaatctcatctacagaaatcgtattagcaatgaa
aatatatttgtaactgctttcgaagagagcaccaacggtatcattgccgtcaatagaaag
ggtcaagtcttatcggtttcaatcgatgacaaaaacatcattccatacatttgcaataca
ctcaacaatttagagttggccatttcaatggcttgtaaaaacaatttaccaggtgctgaa
ggtttactcaccactcaattcgaacgttatttccaacaaggtcaatataaagaggccgcc
aaagttgctgcagattcacctggctctatcttgcgtaaccttcaaaccattcaaaagttc
caatccattccaccaattccagatcaaccatctgctctccttcaatactttggtatgtta
ttagaaaagggtaaactcaataaagttgaatccctcgaattggttcgtccagttttagct
caaggtaaaaaaccaatccttgagaaatggttaactgaagacaaattagaatgttccgaa
caattgggtgatgaagttcgtccacatgatcgtaaattagcactttcaatctattatcgt
gcaaatgcctctgataaagtgatcactttattcgctgaaactggtgaattcgacaaaatc
atcgcctactgtaagaaattcaattataaaccagactttatgttcttacttcaacgtatg
gcaaatgctaatccaatgggtgccgcagatttcgccgttaaattggttaaagaagaaggt
ggtccatacattgatgccaatcaagtcgttgaacttttctctgctcgtaatatgattcaa
gaaactagtaacttcctctttgccattctcgatggtgatcgtccacaagatgcaaacctt
caaaccaaactcttggagatcaatctcttacatgcaccacaaaacgccgatgccattatg
ggtggtcaaaagtttacacattacaatcgtcttagaatcggtggtctttgcgaaaaagct
ggtctctatcaacgtgccctcgaacattacactgatctcgccgatattaaaagagtttta
tctcatgctggtcatatggtgaatcaagagtttttggttagttattttggttccctcaat
ccagaggatcgtatggaatgtatgcgtgatttccttcgtaccaacccacgtcaaaatctt
caattggttgttgcaatcgccgtttcatacagtgaccaaatcactccagaagcaatcatt
gccatgtttgaatctttccgtctctatgagggtctttatctctacttaactcaagtcgtc
gtaaccagtacctcaccagaggttcattttaaatacattgaagccgccgctaaaatcaat
caattcaaagaggtcgaacgtatgtgtcgtgattcaaactactatgatccagaaaagact
cgtgactttttaaaggaagctaaattaccagatcaattaccattgatcattgtttgtgat
cgttacgaattcatctctgatcttaccaactatctctacaaaaacaatctctccaaatat
atcgaagcctacgttcaaaagattaatccagtcaatacaccattggttgtaggtgcactt
ttggatttagattgtcaagaggactatttacgtaatctcattatgagtgttagaaatatg
tgtccagccgattctttagttgaacaagttgaaaagagaaatcgtttgaaacttttactt
ccatggttagaggcaagagttgccgaaggtaacattgaaccagccattcacaacgctttg
gccaagatttacattgattccaataagaatccagaagctttcctcttacacaatcaattc
tatgatagtaaagtcgttggtaaatattgtgaaaaacgtgatccatacctttcattcgtt
gcctacaaacgtggtttatgtgattatgaattgattgaagtcaccaataagaataccctc
ttcaagaatcaagcacgttatcttgttgaacgtcaagatccagatctttgggcttacgtt
ttatccgatcaaaatgaatacaagagatctctcattgatcaagtcgttcaaaccgctctc
ccagaatcaaccaatgccaccgaagtttctgcaactgtcaaggctttcatggatgcaaac
ttaccaaatgaattgattgaattacttgaaaagattgttctcgaaggtaaagaattcaaa
actgccaaagaactccaaaatcttttaattctcactgctattcgtgccgacaagagtcgt
gtcactgattacattaatcgtttagataactttgatggttcaaaattagcaccaatcgcc
attgaatctcaactctacgaagaagccttctttatgtacaagaaattccaattcaatgtt
gaagctatcgatgttttaatcactcatattggttcaattgaaagagctcatgatttcgct
gaacgttgtaatcaaaccgaggtttacagtaaattgggtgttgctcaattgaaagcagaa
atggtcaaagaatgtattgaatcattcattaaagccaatgatactgaacattatcaagag
gttgtcgctgccgctgaaagaaaagatgaatatgaagatttggttaaattccttcaaatg
tgtcgtaagaagattaaagaaccagccattgaaagtgaattgatctttgcttatgctaaa
gttaacaaattggccgaaatggaagatttcatcaactcaccaaactctgctcacattcaa
gtcgttggtgatcgttgtttcgaaaatggtctctatgaagctgccaaagtactctatacc
aatatttccaacttttcacgtcttaccagttgtctcgtcaaattaggtcaatatcaagct
gccgtcgatgctgcacgtaaagccaactccaccaaaacttggaaagaagttagtgctgct
tgcatcgatgccaaggaattccgtttggcacaagtttgtggtatcaatatcattgtacat
ggtgatgaacttgaagaattaattcgtcaatatgaagatcgtggttatttcaatgaatta
atttccctcttagagagtggtcttgcctctgaacgtgctcatgttggtatgttcaccgaa
ttggctattctctactctaaatacaaagaggagaaattaatggaacacttaaaacttttc
tacagtcgtctcaatgttccaaaggttatcaaagcttgtcaagccaatcaacaatggcca
caactcacctacttatacattcattacgatgaacatgataatgccattcaaaccatgatc
aatcattccattgaagcttgggatcatgttctctttaaagaaaccattccaaaggttgcc
aaattggatctctactatagcgccatctcattctatttagaggaacaaccattactcatc
aatgatctcttatcggttttatcaccacgtatcgatcatactcgtgccgtcactttaatt
cgttcattaggtcatctcccattggttaagccatacttggtatctgctcaagatcaaaat
gtagccgctctcaatgaagctctcaatgaattatacgtcgaagaagaggattatgaatcc
ttgagatcctcaatcgatgccaactccaactttggcaccattgctctcgctcaaaaactt
gaaaaacatgaactcctcgaattccgtagaatcgccgcctatttgtacaaaaagaataat
cgttgggctcaatcagttgaactctctaaaaaagataaactctacaaagatgccattcaa
tctgcctcagactcaaagaatccagccattggcgaagaacttttacaatactttgttgat
caacaaaataatagtgcctttgctgcttgtctttacacttgttacgactttttgaaacca
gatgctgtcatcgaattggcttggagaaataatatcctcaattactcattcccatatctc
attcaatacgttaaagaatatacaaccaaagttgatcaattggtcgatgatttcaaagct
cgtcaaaagaaaactgaagaagaaaaagaacaacaaaatattgaatcctctcaatatcaa
ccagatcttactaacctctcatatggttacgcagccactggtggtatgttagctcttcca
ccagctgtaggatatcaacaacaacaacaaccacaacaaatgtataatccaaatcaaatg
atgggtggtttccaacaaaattataatcaatatggtggtttttaa
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integrated database retrieval system
