KEGG   Dictyostelium discoideum (cellular slime mold): DDB_G0292052
Entry
DDB_G0292052      CDS       T00245                                 
Symbol
sec13
Name
(RefSeq) WD40 repeat-containing protein
  KO
K14004  protein transport protein SEC13
Organism
ddi  Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03013  Nucleocytoplasmic transport
ddi04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ddi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    DDB_G0292052 (sec13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    DDB_G0292052 (sec13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ddi03019]
    DDB_G0292052 (sec13)
   04131 Membrane trafficking [BR:ddi04131]
    DDB_G0292052 (sec13)
Messenger RNA biogenesis [BR:ddi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     DDB_G0292052 (sec13)
Membrane trafficking [BR:ddi04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    DDB_G0292052 (sec13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    DDB_G0292052 (sec13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    DDB_G0292052 (sec13)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40
Other DBs
NCBI-GeneID: 8628472
NCBI-ProteinID: XP_629794
dictyBase: DDB_G0292052
UniProt: Q54DS8
LinkDB
Position
6:1099513..1100944
AA seq 301 aa
MATQNVDSGHEDMVHDAQFDYYGKFLATCSSDKMIKIFDVGGENPQHLVDLRGHEGPVWQ
VAWAHPKFGKILASASYDRKVIVWKEVGNNSWSIIHQYAGHELSVNSISWAPHEFGLSLA
CASSDGSVTIHNYNNNVWEAPQKIQVSQIGVNSVSWSPAAIPTSLVNSANTIIPAPIKRI
VTGSCDNLIKIFKNVEDKWILDKQLEDHKDWVRDVAWAPNIGLPYSKIASCSQDRSVIVW
TQDENGVWSGKPLPKFDDIVWRVSWSVIGNILAVSCGDNQVTLWKEGVDSEWKLISHVEN
N
NT seq 906 nt   +upstreamnt  +downstreamnt
atggcaactcaaaatgttgattctggtcatgaagacatggttcacgatgctcaatttgat
tattatggtaaatttttagcaacatgttcatcagataaaatgattaaaatttttgatgta
ggcggtgaaaatccacaacaccttgtagatttaagaggacacgaaggtccagtatggcaa
gttgcttgggcacacccaaaatttggaaagattttagcatcagcatcatacgatcgtaaa
gttattgtttggaaagaagttggtaataatagttggagtatcattcatcaatatgcaggt
catgaattatcagtaaattcaatctcatgggcaccacatgaatttggtttaagtctagca
tgtgcaagttcggatggttcagttacaattcataattataataataatgtttgggaagca
ccacaaaagattcaagtatcacaaattggtgtaaattcagtatcatggtcaccagcagca
ataccaacatcattggtaaatagtgccaatacaattattccagcaccaattaaacgaatt
gttacaggttcatgtgataatttgataaagattttcaagaatgtagaagataaatggatt
cttgataaacaattggaagatcataaagattgggttagagatgttgcatgggcaccaaat
attggcttaccatattctaaaatcgcatcttgttcacaagatcgttccgtcattgtttgg
actcaagatgaaaatggtgtttggtctggtaaacctttaccaaaattcgatgatatcgtt
tggagagttagttggtctgtcattggtaatattttagctgtttcatgtggtgataatcaa
gtaactctttggaaagaaggtgttgattctgaatggaaattaatttctcatgttgaaaat
aattaa

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