Dictyostelium discoideum (cellular slime mold): DDB_G0293036
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Entry
DDB_G0293036 CDS
T00245
Symbol
ddx5
Name
(RefSeq) DEAD/DEAH box helicase
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
3.6.4.13
]
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DDB_G0293036 (ddx5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ddi03041
]
DDB_G0293036 (ddx5)
03009 Ribosome biogenesis [BR:
ddi03009
]
DDB_G0293036 (ddx5)
Spliceosome [BR:
ddi03041
]
Complex A
U1 snRNP components
U1 related factors
DDB_G0293036 (ddx5)
Complex B
DDB_G0293036 (ddx5)
Ribosome biogenesis [BR:
ddi03009
]
Eukaryotic type
Pre-60S particles
Helicases
DDB_G0293036 (ddx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Trypan_PARP
Motif
Other DBs
NCBI-GeneID:
8629006
NCBI-ProteinID:
XP_629283
dictyBase:
DDB_G0293036
UniProt:
Q54CD6
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All DBs
Position
6:2373448..2375541
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AA seq
697 aa
AA seq
DB search
MNKYKNKYNTDNKFNNSKYIKNNQVELSKQELEDEEILKINDDEFNEGLNKQALFQQDDY
VYKFKKQQKEEKIGGDEKTQIDNEKPEDFNITLKSIDFKSINLPSFKKRFLQSSTIKDID
SFEFINSTTEFIIENKSDDDNYYDDDDDDEGDKNKEKEKEKEKEKEKEKEKEKEKEKEKE
KEKEKEKNKEIENKTYPNNCKIPIANTGESECLPNTLKLFFKKTQFPTPTLFQQYAWPAI
LTGHDIIGTSLPGSGKTLGYLAPMIPHCLARVDRGGKNKITGEKAPKQYTGILVLVLVPT
RELGLQVHSNTLIITQLFGIKTSVIYGGISKNLQIEQLEKEKPQILISTPGRLIEMIENG
HVDLSSVTMLVLDEADKMLSKGLIPQLKQIRGQIRPDSQNILFSATFPDSLKEVSKDWIK
DPSIRLRIGSSELPKLNHIQQDAQLIAHHKKPRALIKLLSEPQFKEKKKTIVFFNKIKEL
KRISIMLLKSNIKHDTIFGNIDQELREKLINKFSSSRSTLLLSTDIIGRGIHIDDIFNII
NYDFPRSLEQYCHRVGRAGRSDKVVNPKAFSFLTNSDSYLVEPFVQFLKDQHQNISIPFL
KLCNENFGTKFEFTLSKRKQKKLAQKDDVEKDDEAYLAKYEKLIKKDRKKDSDDECKKFK
SFKRKNIDSDSDNDSDSNSDNGKETKSKDKNKKFKKY
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatataaaaataaatataatactgataataaatttaataatagtaaatatatt
aaaaataatcaagttgaattaagtaaacaggaattagaggatgaagaaattttaaaaata
aatgatgatgaatttaatgaaggattaaataaacaagctctatttcaacaagatgattat
gtatataaatttaaaaaacaacaaaaagaagaaaaaataggtggtgatgaaaaaacacaa
atagataatgaaaaacctgaagattttaatataaccttaaaatcaatagattttaaatca
attaatttaccttcttttaaaaaaagattcttacaatcatcaacaattaaagatattgat
tcatttgaatttataaattcaactacagaatttataattgaaaataaaagtgatgacgat
aattattatgatgatgatgatgatgatgaaggtgacaaaaataaagaaaaagaaaaagaa
aaagaaaaagaaaaagaaaaagaaaaagaaaaagaaaaagaaaaagaaaaagaaaaagaa
aaagaaaaagaaaaagaaaaaaataaagaaattgaaaataaaacatatccaaataattgt
aaaataccaattgcaaatacaggagaaagtgaatgtttaccaaatacattaaaattattt
tttaagaaaactcaatttccaacaccaactttatttcaacaatatgcatggccagcaatt
ttaacaggtcatgatattattggtacaagtttaccaggatcaggtaaaacattgggttat
ttagcaccaatgataccacattgtttagcaagagttgatagaggcggaaagaataaaata
acaggggaaaaagcaccaaaacaatatacaggtattttagtattggtattagtaccaaca
agagaattaggtttacaggttcatagtaatacattgataatcactcaactatttggaatt
aaaacatcggttatatatggtggtatttctaaaaaccttcagattgaacaattggaaaaa
gaaaaaccacaaattttaatatcaacaccgggtcgtttaattgagatgatagagaatggt
catgttgatctttcaagtgttacaatgttagtactggatgaggctgataaaatgctttcc
aaaggtttaataccacaacttaaacaaattcgtggtcaaattagacccgattcacaaaat
atattatttagtgccacttttccagattcattaaaagaggtttcaaaagattggattaaa
gatccatcgattcgtttaagaattggttcttcagaattaccaaaactaaatcatattcaa
caagatgctcaattaattgcccaccataaaaaaccacgtgcactcattaaactattaagt
gagccacaatttaaagaaaagaagaaaacaattgtattctttaataaaattaaagagcta
aagagaatttcgatcatgttattaaaatcaaatattaaacatgatacaatctttggtaat
attgatcaagagttgagagagaaactcattaataaattctcaagttcacgatcaactcta
ttactctcaaccgatatcattggtcgtggtattcatatcgatgatattttcaatattata
aattatgattttccaagatctctagaacaatattgtcatagagttggccgtgctggtaga
tccgataaagttgtaaatccaaaagcatttagtttcctcacaaacagtgattcttatttg
gttgaaccttttgttcaattcctaaaagatcaacatcaaaatatctccattccattctta
aagctatgtaatgaaaactttggtacaaaattcgaattcacactttcaaaaagaaaacaa
aagaaattggctcaaaaagatgacgttgaaaaagatgatgaagcttacttggcaaaatat
gaaaaattaattaaaaaagatagaaaaaaagatagtgatgatgaatgtaaaaaatttaaa
tcatttaaaagaaaaaatattgatagtgatagtgataatgatagtgacagtaatagtgat
aatggtaaagaaacaaagagtaaagataaaaataaaaaatttaaaaaatattaa
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