Pseudodesulfovibrio mercurii: DND132_3102
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Entry
DND132_3102 CDS
T01709
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
ddn
Pseudodesulfovibrio mercurii
Brite
KEGG Orthology (KO) [BR:
ddn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ddn03000
]
DND132_3102
Transcription factors [BR:
ddn03000
]
Prokaryotic type
Helix-turn-helix
Other families
DND132_3102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF
AAA_5
PAS_4
AAA
Mg_chelatase
MCM
HTH_30
AAA_19
PAS_8
AAA_2
AAA_22
PAS
TIP49
TsaE
AAA_3
HTH_23
AAA_16
PAS_9
HTH_50
HTH_7
Motif
Other DBs
NCBI-ProteinID:
EGB16305
UniProt:
F0JK56
LinkDB
All DBs
Position
complement(3465663..3467732)
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AA seq
689 aa
AA seq
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MHLLLRDGNGFEIRRDPHAPDAAVTLPISCAHKQRNAQLSYSNWKQFVEGKRLKNKNVDR
ALLDSWQRCKDMAVDPAPRSCWDFLPMNQLEQFTTTLEKICGEVESTAYEVIKGKGLLMT
IVNADARVARTCGDMDVLREADKLNFGPGANWSESCVGTNAIGTALATGRPMQVFASEHF
CESHHSWNCTAAPILDPRGNVWGCFDVSGPTSSDHSGAMDLVLHAARALEQNLSRLYCSE
LEGQMASLFSSMFNSVMTGVLFLNKSGRITSANNTAELLLCRPGGALRGRKAEELFDMGP
YLAQAKNASLCEPVIVKCLVNPGLYIRVMPTFSASGAWLDTIVTVSETQRSRQFTTGPAA
SPRKPAEPEEVKGFEHVLHGSSAMRQVIRQAANAARTPSTILLTGESGTGKELFARGIHQ
AGPRAKQPFVAVNCGAFSEELVQSELFGYREGAFTGAVKRGRVGKFQKADKGVLFLDEIS
EMPMSQQVNLLRALEERAVVPVGGTSPLPVDVKILAATNKNLRELVDQGRFREDLYYRLN
VVTIAIPPLRERGNDVTLLAEYHLRRLCDSFGIPCPAIAAETRELLAGHEWPGNVRELIN
CLEYAANNLTGDLLLPEHLPHYLLERTSGKAVSGNGHAKGKGFLLKQREANAIREALDFH
DGNISKTAKALGIGRNTLYAKMERYHIEG
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgcacctgctcctcagagatggaaacggattcgaaatacgacgggacccgcacgcgccg
gatgcggcggtgacgctgcccatatcctgcgcccataaacagcggaacgcccaactgagt
tactcgaactggaaacagttcgtcgaaggcaaacgcctgaaaaacaaaaacgtggaccgg
gccctgctggactcctggcaacgctgcaaggacatggccgttgatccggccccgcgcagc
tgctgggactttctgcccatgaaccagctggagcagttcaccaccaccctggaaaagatc
tgcggcgaggtcgaatccacggcctacgaggtcatcaagggcaaggggctgctcatgacc
atcgtcaacgccgacgcccgcgtggcccgcacctgcggcgacatggacgtcctgcgcgag
gcggacaagctgaacttcggccccggcgccaactggtccgagtcctgcgtgggcaccaac
gccatcggcaccgccctggccacgggtcgccccatgcaggttttcgcctcggagcacttc
tgcgagtcccaccacagctggaactgcaccgccgctccgatcctggacccgcgcggcaac
gtctggggttgcttcgacgtctccggtccgacctcgtccgaccactcgggcgccatggac
ctggtcctgcacgcggcccgcgccctggaacagaacctgagccgcctctattgttccgaa
ctcgaaggccagatggcctccctgttctcctccatgttcaactcggtcatgaccggcgtg
ctgttcctgaacaagtccggcaggatcaccagcgccaacaacaccgccgagctgctcctg
tgccgtcccggcggcgccctgcgcggccgcaaggccgaggaactcttcgacatgggtccg
tacctggcccaggccaagaacgcctccctgtgcgagccggtcatcgtcaagtgcctggtc
aaccccggcctgtacatccgggtcatgccgaccttcagcgccagcggcgcgtggctggac
accatcgtcacggtcagcgagacccagcgctccaggcagttcaccacgggtccggccgcc
tcgccccgcaagcctgcggagcccgaggaggtcaagggcttcgagcacgtgctccacggc
agctcggccatgcgtcaggtcatccgccaggcggccaacgcagcccggaccccgtccacg
atcctgctgaccggcgagtccggcaccggcaaggagctgttcgcacggggcatccaccag
gccggtcccagggccaaacagcccttcgtggccgtcaactgcggcgcgttctccgaggag
ctggtccagagcgagctgttcggctaccgcgagggcgccttcaccggcgcggtcaagcgc
ggccgggtgggcaagttccagaaggcggacaagggcgtgctcttcctggacgaaatctcc
gaaatgcccatgtcccagcaggtcaatctgctccgggccctggaggagcgggccgtggtc
ccggtgggcggcaccagccccctgcccgtggacgtgaagatcctggccgccaccaacaag
aacctgcgcgagctggtggaccaggggcggttccgcgaggacctctactaccggctcaac
gtggtcaccatcgccatcccgcccctgcgggagcgcggcaacgacgtgaccctgctggcc
gagtaccacctgaggcggctgtgcgactccttcggcatcccctgcccggccatcgccgcc
gagaccagggagctgctcgccggccacgaatggcccggcaacgtccgcgagctgatcaac
tgcctggagtacgcggccaacaacctgaccggggacctgctcctgcccgagcacctgccc
cactacctcctggaacggaccagcggcaaggccgtctccggcaacgggcacgccaagggc
aagggcttcctgctcaagcagcgcgaggccaacgccatccgcgaggccctggacttccac
gacgggaacatcagcaagacggccaaggcgctgggcatcgggcgcaacaccctgtacgcc
aagatggagcgctaccacatcgagggctga
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