Dickeya dianthicola: DDI_1610
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Entry
DDI_1610 CDS
T05141
Name
(GenBank) Oligopeptide transport system permease protein OppB
KO
K13896
microcin C transport system ATP-binding protein
Organism
ddq
Dickeya dianthicola
Pathway
ddq02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ddq00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DDI_1610
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ddq02000
]
DDI_1610
Transporters [BR:
ddq02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Microcin C transporter
DDI_1610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
oligo_HPY
AAA_22
AAA_16
AAA_29
AAA_25
AAA_13
Mg_chelatase
AAA_7
MeaB
Motif
Other DBs
NCBI-ProteinID:
ATO32778
LinkDB
All DBs
Position
complement(1620493..1622085)
Genome browser
AA seq
530 aa
AA seq
DB search
MSAHPLLEIRDLSIAFRNGGQQRQVVDQVSLSIEAGETLALVGESGSGKSVTALSVLRLL
PSPPVVYLHGDILFAGESLLNASEQRLRQVRGDRIAMIFQEPMVSLNPLHTIEKQLAEVL
SLHRGMRRDAARGEIVGCLERVGIRQAARRLADFPHQLSGGERQRVMIAMALLTQPDLLI
ADEPTTALDVTVQAQILDLLNELKQELNMGLLFITHNLNIVRRLADRVAVMQAGRCVEQN
RTRELFSAPQHPYTRQLLNAEPTGEAPPLEPTASTLLDVRELGVSFPIRRGLLRRTVGEK
SVLQALSFSLRRGESIGLVGESGSGKSTTGLALLRLLRSRGEIWFDGQPLHRFNHKQMLP
VRRRIQVVFQDPNGSLNPRLNVEQIIAEGLRVHHPLSPAEQTQRVIQSMQEVGLDPDSRH
RYPSEFSGGQRQRIAIARALILQPELLILDEPTSSLDRTVQAQILTLLKTLQQTHQLAYL
FISHDLHVVRSLCHQVIVLRHGEVVEQGECRQLFEHPQQDYTRQLLQLSA
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcacaccctttacttgaaatccgcgacctgagcattgcgtttcgcaacggcggt
cagcagcggcaggtggtcgaccaggtttcgctgagcattgaggctggagaaacgctggcg
ctggtcggcgagtccggctccggcaaaagcgtcaccgcgctgtcggtactgcgtttgttg
ccctcgccgccggtggtctacctgcacggcgatatcctgtttgccggcgaatcgttgctg
aatgccagcgagcagcggctgcgccaggtgcgcggcgaccggattgccatgatctttcag
gagccgatggtgtccctcaacccgctgcacaccattgaaaagcaattggcggaagtgctc
tcgctgcaccggggcatgcgccgcgacgctgcccgcggcgaaatcgtcggttgccttgaa
cgcgtcggtattcgccaggcagcgcgtcggctggcggattttccccaccagctttccggc
ggcgaacgccagcgggtgatgatcgcgatggcgctgctgacgcagcccgatctgctgatt
gccgacgaaccaaccaccgcgctggacgtcaccgtacaggcgcaaattctggatttgctc
aacgagctgaaacaagagctgaacatgggcttgctgttcattacccataacctgaacatt
gtgcgccggctggcggaccgggtagcggtgatgcaggccgggcgctgcgtggagcagaac
cgaacccgcgagttgttcagcgcgccgcaacatccgtatacccgacaattgctgaatgcc
gagccgacaggcgaagccccgccgctggagccgaccgcatcgacgttgctggatgtccgg
gagctgggcgtcagcttccccatcaggcgtggtctactacgccgcacggtgggggaaaaa
tcggtgctgcaggcgctcagctttagcctgcgccgcggcgaaagcatcgggctggtgggc
gaatccggttccggcaagagcaccactgggctggcgttgctgcgcttgctgcgcagccgt
ggcgagatctggttcgatggccaaccgctgcaccgttttaaccacaagcagatgctgccg
gtacgtcgccgcattcaggtggtgtttcaggatccaaacggttcgctgaatccccgtttg
aacgtggagcagattatcgcggaagggctgcgggttcatcacccgttaagcccggcggag
cagacgcagcgagtgatccagtccatgcaggaagtcgggctggatccggacagccgccat
cgctatccgtcggaattttccggcggccagcgccagcgtatcgctatcgcccgtgcgttg
atcctgcaaccggaactgctgattctcgacgaacccacctcatcgctcgatcgcacggtg
caggcgcaaattctgacgctgctgaaaaccctgcaacaaacccaccagttggcctacctg
ttcatcagccacgatctgcacgtggtgcgttcactgtgtcatcaggtcattgtgctgcgg
cacggcgaagtggtcgagcaaggcgagtgtcggcaactgtttgaacacccgcagcaggac
tacacccgtcagctactgcaactgtcggcctga
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