Deinococcus deserti: Deide_22590
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Entry
Deide_22590 CDS
T00880
Symbol
groL
Name
(GenBank) putative 60 kDa chaperonin (Protein Cpn60) (groEL protein)
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ddr
Deinococcus deserti
Pathway
ddr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ddr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Deide_22590 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ddr03019
]
Deide_22590 (groL)
03110 Chaperones and folding catalysts [BR:
ddr03110
]
Deide_22590 (groL)
03029 Mitochondrial biogenesis [BR:
ddr03029
]
Deide_22590 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ddr04147
]
Deide_22590 (groL)
Enzymes [BR:
ddr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Deide_22590 (groL)
Messenger RNA biogenesis [BR:
ddr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Deide_22590 (groL)
Chaperones and folding catalysts [BR:
ddr03110
]
Heat shock proteins
HSP60 / Chaperonin
Deide_22590 (groL)
Mitochondrial biogenesis [BR:
ddr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Deide_22590 (groL)
Exosome [BR:
ddr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Deide_22590 (groL)
Exosomal proteins of other body fluids (saliva and urine)
Deide_22590 (groL)
Exosomal proteins of breast cancer cells
Deide_22590 (groL)
Exosomal proteins of colorectal cancer cells
Deide_22590 (groL)
Exosomal proteins of bladder cancer cells
Deide_22590 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
BD_b_sandwich
Motif
Other DBs
NCBI-ProteinID:
ACO47289
UniProt:
C1CZP1
LinkDB
All DBs
Position
2713044..2714693
Genome browser
AA seq
549 aa
AA seq
DB search
MAKQLVFDEAARRSLERGVNAVANAVKVTLGPRGRNVVIEKKFGSPTITKDGVTVAKEVE
LEDKLENIGAQLLKEVASKTNDITGDGTTTATVLGQAIVKEGLRNVAAGANPLALKRGIE
KAVAAAIVEIQNLAVPVEDSDAIKKVAGISANDDQVGEEIASAMDKVGKEGVITIEESKG
FDTEVDVVEGMQFDKGFINPYFVTNPEKMEAVLEDAYILINEKKISNLKDLLPVLEKVAQ
TGRPLLIIAEDVEGEALATLVVNKLRGTLNIAAVKAPGFGDRRKEMLRDIAAVTGGEVVS
EDLGHKLENTGMEMLGRAARIRITKDETTIVDGKGEQAQIDARVNAIKGELDTTDSDYAR
EKLQERLAKLSGGVAVIRVGAATETELKEKKHRYEDALSTARSAVEEGIVAGGGTTLLRI
IPAVRKAAEGLQGDEATGARILIRALEEPARQIAVNAGEEGSVIVNAVINSDKPRYGFNA
ATGEYVDDMVAAGIVDPAKVTRTALQNAASIGALILTTEAIVSDKPEKPQQGGQGGGGMG
GGDMGGMDF
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcaacttgtatttgatgaagccgcccgtcgcagcctggagcgcggcgttaac
gccgtcgccaacgccgtcaaagtgacccttgggccccgtggccgtaacgtcgtgatcgag
aagaagttcggcagccccaccatcaccaaggacggcgttaccgtcgccaaggaagtggag
ctggaggacaagctcgagaacatcggcgcccagctgctcaaggaagtcgccagcaagacc
aacgacatcaccggtgacggcaccaccaccgccacggtgctgggccaggccatcgtgaaa
gaaggcctgcgcaacgttgctgccggcgccaaccccctggccctcaagcgcggcatcgag
aaggctgtcgccgcggccatcgtcgaaatccagaacctggctgtgccggtcgaggactcc
gacgccatcaagaaagtcgccggcatcagcgccaacgacgatcaggtcggcgaggaaatc
gcctccgcgatggacaaggtcggcaaggaaggcgtcatcaccatcgaggaaagcaagggc
tttgacaccgaagtggacgtcgtcgaaggcatgcagttcgacaagggctttatcaacccc
tacttcgtgaccaaccccgagaagatggaagccgtcctggaagacgcctacatcctgatc
aacgagaagaagatcagcaacctcaaggacctgctgcccgtgctggagaaggtcgcccag
accggccgtcctctgctgatcatcgctgaagacgtcgaaggcgaagcgctggccaccctg
gtggtcaacaagctgcgcggcacgctgaacatcgctgccgtcaaggcgcccggcttcggt
gaccgccgtaaggaaatgctgcgcgacatcgccgccgtcaccggcggggaagtggtcagc
gaggacctgggccacaagctggagaacaccggtatggagatgctgggccgcgccgcgcgc
atccgcatcaccaaggacgagaccaccatcgtggacggcaagggcgagcaggcccagatc
gacgcccgcgtcaacgccatcaagggtgagctcgacaccaccgacagcgactacgcccgt
gagaagctccaggagcgcctcgccaagctgagcggcggtgtggccgtgatccgcgtcggt
gctgccaccgaaacggaactcaaggagaagaagcaccgctacgaggacgccctgtccacc
gcgcgcagcgccgtggaagaaggcatcgtggccggtgggggcaccaccctgctgcgcatc
atccccgctgtccgcaaggccgctgaaggcctgcagggcgacgaggccaccggcgcgcgc
atcctgatccgcgccctggaagagcccgcccgccagatcgccgtcaacgccggcgaggaa
ggcagcgtcatcgtcaacgccgtgatcaacagcgacaagccccgttacggcttcaatgcc
gcaaccggcgagtacgtcgatgacatggttgctgccggtatcgtagaccccgccaaggtg
acccgcactgcgctgcagaacgcggccagcatcggcgcactgatcctgaccaccgaagcc
atcgtctctgacaagcccgagaagccccagcagggcggccagggcggcggcggtatgggc
ggcggcgacatgggcggtatggacttctaa
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