Dehalobacter sp. DCA: DHBDCA_p1188
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Entry
DHBDCA_p1188 CDS
T02278
Symbol
xerD
Name
(GenBank) phage integrase family protein
KO
K04763
integrase/recombinase XerD
Organism
ded
Dehalobacter sp. DCA
Brite
KEGG Orthology (KO) [BR:
ded00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ded03036
]
DHBDCA_p1188 (xerD)
Chromosome and associated proteins [BR:
ded03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
DHBDCA_p1188 (xerD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_5
Phage_int_SAM_4
Motif
Other DBs
NCBI-ProteinID:
AFV02217
LinkDB
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Position
1228144..1229157
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AA seq
337 aa
AA seq
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MKPTDFATYLTEFLSIYLPGQKNASRNTIASYRDTFKLLIRYCQEQRDIPVEKLKMSMLT
NGLITDFLEWIEKSRKCSIATRNQRLAAIHSFYRYAQYEEPSGILHFQKVIAIPIKKTSK
PSVPHLTPEAMKLLLSQPGKMTSKGRRDLTLLSVLYDSGCRVQELADLKVRDVVLNNPAV
LILTGKGNKVRRVPLMKNTMTLLEHYIQENSLDKPWKSDYPLFINKQHNKLTKEGIAYII
SQYVSLARKISTIVPEKVMPHMFRHSKSMHLLQAGVNLIYIRDFLGHEDIKTTEIYAKCD
SELKRKAIENAYPDLVDSNLPDWNKDAALLVWLSNLK
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgactgattttgctacctaccttacagaattcctttccatatatctgcccggg
cagaaaaatgcaagcagaaatacaatagcgtcctaccgtgatacctttaaattattaatc
cggtattgtcaggaacagagggacatccctgtcgaaaagctgaagatgagtatgctgaca
aatgggctgattactgatttcttggaatggattgaaaaaagtcgcaagtgcagcattgca
actcggaatcagaggcttgcagccatacattccttttaccggtatgcacagtacgaagaa
ccgtcaggaatacttcatttccaaaaggtaatagccataccaattaagaagacatccaaa
ccatcggtaccacatctgacgcctgaggcaatgaaacttttattatcacagcctggcaag
atgacatcaaaaggcagacgagatctaacactgttaagcgtcctttacgactccggatgc
agggtgcaggaattagccgacctcaaggtgcgtgatgttgtactcaataatccagcagta
cttatccttacaggaaaaggtaataaggtacgaagggttccactgatgaaaaacactatg
actttgttggagcattatattcaggagaattcccttgataagccctggaaaagtgattat
cctctctttattaataagcagcacaacaagctcacaaaggaaggcatagcttacattatt
tctcagtacgttagtttagcaagaaagatatccacgattgtgccggagaaagtgatgccc
catatgtttcgacattcgaaaagcatgcacctgctgcaggccggtgtcaaccttatctat
atccgagactttcttgggcatgaggatatcaaaaccaccgaaatttatgcaaagtgtgat
tctgagttgaaacgcaaggctattgagaatgcctatccagatttggtagatagtaatctt
cctgattggaataaagatgctgcattacttgtctggctttcgaatctcaagtag
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