Dehalococcoides mccartyi GT: DehalGT_0335
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Entry
DehalGT_0335 CDS
T01182
Name
(GenBank) Xylose isomerase domain protein TIM barrel
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
deg
Dehalococcoides mccartyi GT
Pathway
deg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
deg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DehalGT_0335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
deg03400
]
DehalGT_0335
Enzymes [BR:
deg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
DehalGT_0335
DNA repair and recombination proteins [BR:
deg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
DehalGT_0335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ADC73702
LinkDB
All DBs
Position
complement(318328..319158)
Genome browser
AA seq
276 aa
AA seq
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MAGLLFGTAGIPYSTPKHTTQNGIHRVAELGLDGMEIEFVRGVYMKAPDTNPVRILSDLL
RIKLSAHAPYYLNFNAVEENKVKMSQHLLYQSAKMAHLCGAGSLVFHPGFYLTDSPSAAY
ESIRDNIRPVASRLQEEGFDITLRPEVSGKVTQFGDLKETMALCSEIPGLLPTIDFSHYH
ARTGKYNSYSEFSFMLSTMADYLGENAVLNMHIHVSGIDYSPRGEKQHLNLADSDFNYKE
LLLALRDRGCAGLVICESPNIEEDALLLKETYFSLA
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtttacttttcggcaccgccggcattccctactccacccccaaacacaccacc
cagaatggaattcacagggtggcggaactggggctggacggcatggaaatagaatttgtc
cgcggggtatatatgaaagccccggataccaacccggtcagaatcctttcggatcttctg
cgtataaaactgtctgcccatgccccgtactatctgaactttaatgcagttgaagaaaat
aaagtcaaaatgagccagcacctgctttaccagtctgccaaaatggctcacctctgcggg
gcagggtcactggtatttcaccccggtttttacctgacagactcgccttctgctgcctac
gaatccatacgggataatatccgccctgttgccagccgtcttcaggaagaaggctttgat
ataacccttcgacccgaggtaagcggtaaggtgacccagttcggagacctgaaagagact
atggcactgtgcagtgaaatacccggcctattgccgactatagatttttcccactatcat
gcccgtaccggtaaatacaactcctattcagagttcagctttatgttaagtaccatggct
gactatctgggtgaaaacgcagttctaaatatgcatatacacgtttcgggcatagactac
tctcccagaggggaaaaacagcacctgaatctggctgattcagatttcaattacaaagaa
ttgctgctggctctgagagacaggggctgtgcagggctggtaatatgtgaaagccctaat
atagaagaagatgccctgctcctgaaagagacctacttctctctggcctaa
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