Cavenderia fasciculata (cellular slime mold): DFA_04616
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Entry
DFA_04616 CDS
T02668
Symbol
prp19
Name
(RefSeq) WD40 repeat-containing protein
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03040
Spliceosome
dfa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DFA_04616 (prp19)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
DFA_04616 (prp19)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dfa03041
]
DFA_04616 (prp19)
04121 Ubiquitin system [BR:
dfa04121
]
DFA_04616 (prp19)
03400 DNA repair and recombination proteins [BR:
dfa03400
]
DFA_04616 (prp19)
Enzymes [BR:
dfa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
DFA_04616 (prp19)
Spliceosome [BR:
dfa03041
]
Complex B
Other components
Prp19 complex
DFA_04616 (prp19)
Complex C
Prp19-CDC5 complex
DFA_04616 (prp19)
Ubiquitin system [BR:
dfa04121
]
Ubiquitin ligases (E3)
U-box type E3
DFA_04616 (prp19)
DNA repair and recombination proteins [BR:
dfa03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
DFA_04616 (prp19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Prp19
ANAPC4_WD40
NBCH_WD40
eIF2A
WDR54
Frtz
Nup160
U-box
Lum_binding
Cytochrom_D1
zf-Nse
Apis_Csd
Motif
Other DBs
NCBI-GeneID:
14874566
NCBI-ProteinID:
XP_004360339
UniProt:
F4PQ25
LinkDB
All DBs
Position
Unknown
AA seq
509 aa
AA seq
DB search
MICSLSGELAQEPVVSIKSGNIYEKRLIEKYIDANGREPTTGQPLALTDLVTIVKIGNSS
NNNSNGAGTKPRVGTTTSIPGMLQMFQNEWDALMLETFTLRQQFESVRQELAHSLYQYDA
ACRVIARLIKERDAAKSALANTPIRTVTNNNNNNNNNNNNNNNNDQMDVENTQKLPQDIL
TKVGDLSKALSAQRKKRSKPEKLPTTEEIKSYAILASNEAQQSTGGLSSVDQHGSLVVVG
SGGDDGEVTVYDNDSSSVKKSLKGHTKRVESVAFTPNGRSVVSGSRDRTVRLWNVESGQS
QSAKYSGEVLSVNVHPSGDIVAVGGSDRSWALFDISSGSSSLNQILKNGNAANGPCGAVR
FHPDGAILGVGSDDGQISLWDISQNKRAITLTAHTQAVRSISFSENGYFMVSCDDSVAKV
WDLRKSTCLQTFDIDGKHGHSVSFDHSGSYIAIAGSSLTIVNLSGKSSFEITKQLDGQGG
LYNRAIWSLDSQTLTTVSEDGLIKLWGSQ
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgatttgttcactatcaggagaattggcacaagagccagtagtatcgattaaatcagga
aatatatatgaaaagagattgattgaaaagtatatagatgcaaatggacgtgaaccaact
actggacaaccattggcattgactgatttggttacaatcgtcaagattggcaatagcagt
aacaataatagtaatggagctggtaccaaaccacgtgttggtacaaccactagtatccca
ggtatgcttcaaatgttccaaaacgaatgggatgcactcatgttggaaacatttacactt
agacaacaatttgaaagtgttcgtcaagaattggctcattcactctatcaatacgatgct
gcttgtcgtgtcattgctagattaattaaagaaagagatgctgctaaatctgcactcgca
aatacaccaattagaacagtaacaaataataacaataataataataataataataataac
aataataataatgatcaaatggatgttgaaaatacacaaaaattaccacaagatattctt
accaaagttggagatttatctaaagcattatcagcacaaagaaagaaaagatcaaaacca
gagaaattaccaacaactgaagaaattaaatcatatgcgatcttggcatcgaatgaagca
caacaatcgactggaggattatcaagtgttgatcaacatggatcgttggttgtagttggt
agtggaggtgatgatggtgaggttacagtatacgataacgatagttcaagcgtaaagaaa
tcactcaagggacacacaaagcgtgtagagagtgttgcttttacaccaaatggacgatcg
gttgtatctggatcacgtgatcgtacagttagattgtggaatgttgaatctggtcaaagt
caatctgccaaatacagcggtgaagtcttgtctgtcaatgtacatccatcgggcgatatc
gtcgccgttggtggaagtgatcgtagttgggcactatttgatattagcagcggatcatcg
tcattgaatcaaatattaaagaatggtaatgctgccaacgggccatgcggagctgtacgt
ttccacccagatggcgctattcttggtgtaggtagtgacgatggacagatttcattgtgg
gatattagccaaaacaagcgtgccatcaccctcactgctcacactcaagcagtacgttcc
atctcgttttcagagaatggttactttatggtcagttgcgatgactctgttgccaaggtt
tgggatctccgtaaatcaacgtgtctccaaacatttgacattgacggcaagcacggtcac
tctgtctcttttgatcatagtggtagctatattgccattgctggttcgtcactcaccatt
gtaaatctctctggcaaatcatcatttgaaatcaccaagcagttggatggacaaggtggc
ctttataatcgtgctatttggagtctcgattctcaaactttaacaacagtctctgaagac
ggtttaattaaattatggggttctcaataa
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integrated database retrieval system
