KEGG   Desulfotomaculum gibsoniae: Desgi_1819Help
Entry
Desgi_1819        CDS       T02657                                 

Definition
(GenBank) DNA polymerase LigD, polymerase domain protein
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
dgi  Desulfotomaculum gibsoniae
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:dgi00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    Desgi_1819
Enzymes [BR:dgi01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Desgi_1819
DNA repair and recombination proteins [BR:dgi03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     Desgi_1819
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
1857068..1858021
Genome map
AA seq 317 aa AA seqDB search
MAEIRREMVEIHGRVLTLTNLDKPFWPEMGLTKAHLIKYYLDMAPYILPYIYNRPLVMKR
YPDGIKGDFFYQKECPSYAPEWVETYPVRHTGKITNYVVCNDTATLIWLANQGCVEIHAW
LSRIEDVDYPDLAIFDLDPAEGVSFAEVLKVALLVRDMLVEFALTGFPKTSGSSGLHIFI
PLTKRYTFAEITEAMKSMAEIIVRAYPERVTTQRSISKRKGKVYLDYLQNGRGKTMAFIY
SLRPLPGAPVSTPLTWAEVEEKNIKPGCFNMENILKRVKAVGDLFNGFMETKNNIDLFVE
KRKPLILDANTIDSDPF
NT seq 954 nt NT seq  +upstreamnt  +downstreamnt
gtggccgagataaggcgggaaatggtagagatacatgggcgagtattgacccttactaac
cttgataagcctttttggcctgaaatgggcttaaccaaagctcatttaataaaatactac
cttgatatggcaccttatattttgccatacatttataaccggccgctggtcatgaaaaga
tatcccgatggtataaaaggagattttttttatcaaaaggaatgcccttcatacgcgcct
gaatgggtggaaacttacccggttcggcataccggtaaaattaccaattatgtggtgtgt
aatgacactgcaaccctgatttggttagccaaccagggttgcgtggaaattcacgcctgg
ctaagccggatagaggacgttgattatccggatctggccatatttgatttagatcccgct
gaaggggtgtcctttgccgaggtgttgaaagtggccctattggtgcgggatatgctggtt
gaattcgccttaaccggatttcccaaaacatcaggctcaagcgggctgcatatttttatt
cccttgacgaaaaggtatacctttgctgaaataactgaagccatgaaaagtatggccgaa
ataatcgtcagggcctatcccgaaagggtaaccacgcaaagaagtatttccaagcgtaaa
gggaaggtttatcttgactatctacaaaacggtcggggtaaaaccatggcttttatatac
agcctcaggccgctgccgggagcccccgtatccacacctttaacctgggcggaagtggaa
gaaaaaaatattaagccgggttgttttaatatggagaatattttaaagcgagtgaaagct
gtcggtgatttatttaacggctttatggaaacaaaaaataacattgatttgtttgtcgaa
aaaaggaaaccattaatacttgatgctaatactattgattcagatcctttttaa

DBGET integrated database retrieval system