KEGG   Deinococcus gobiensis: DGo_PD0063
Entry
DGo_PD0063        CDS       T01827                                 
Symbol
vapC
Name
(GenBank) virulence-associated protein VapC1
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
dgo  Deinococcus gobiensis
Brite
KEGG Orthology (KO) [BR:dgo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dgo03016]
    DGo_PD0063 (vapC)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:dgo02048]
    DGo_PD0063 (vapC)
Transfer RNA biogenesis [BR:dgo03016]
 Prokaryotic type
  tRNA degradation factors
   DGo_PD0063 (vapC)
Prokaryotic defense system [BR:dgo02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    DGo_PD0063 (vapC)
SSDB
Motif
Pfam: PIN
Other DBs
NCBI-ProteinID: AFD28137
UniProt: H8H3P0
LinkDB
Position
P4:62442..62858
AA seq 138 aa
MSVTHLLDTNTCIYIINRRPPGVAEKFAQFSPDAIGLSSITLAELHFGVAKSGSTKNLKA
LEAFLEPLEVLPFSAAASVLYGRIRTELERQGQPIGAMDLLIAAHALTLGVTLVTHNRRE
FDRVAGLQIDNWFSPEVR
NT seq 417 nt   +upstreamnt  +downstreamnt
atgtccgtcacccacctcctcgacacgaacacctgcatctacatcatcaaccgtcgtccc
ccaggcgtcgctgaaaagttcgcgcagttttcaccggacgccatcggtctgtcgagcatc
acccttgccgaactgcattttggcgtagccaagagcggctcgaccaagaacctcaaggcg
ctggaggctttccttgaacctctggaagtgctgcccttcagtgcggccgccagcgtcctg
tatggccgcatccgcaccgagttggagcggcagggccagccgatcggcgcgatggatctc
ctgattgctgctcatgccctgaccctgggcgtcaccctcgtgacccacaaccgcagggag
tttgaccgggtggctggcctccagatcgacaactggttcagtccggaagttcgctga

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