Delftia sp. HK171: BO996_23290
Help
Entry
BO996_23290 CDS
T04584
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
dhk
Delftia sp. HK171
Pathway
dhk02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dhk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BO996_23290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dhk03021
]
BO996_23290
Transcription machinery [BR:
dhk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BO996_23290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_7
HTH_28
Motif
Other DBs
NCBI-ProteinID:
APE51743
LinkDB
All DBs
Position
5295473..5295988
Genome browser
AA seq
171 aa
AA seq
DB search
MSCPAVTPHQALAHLYQQHHGWLRTWLQRRLGHAGDAADFAQDTYVRVMESRTELSEIRE
PRAFLTTVAKRVMANHLRRREIERAYLDTLALQPEPLAPSPEERAIVLETLCELDRLLDG
LPPKVRAAFLHAQLDGMAYAEIALLLQVSVSSVKQYMARAIRHCYFPEHAA
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
gtgtcctgtcccgccgtgactccccaccaggcccttgcccatctctaccagcagcaccat
ggctggctgcgcacctggctgcagcgccggctgggccatgcaggcgatgcggcagatttc
gcacaggacacctacgtgcgcgtgatggagtcccgcaccgaactgtccgagatccgggag
ccccgcgccttcctcaccacggtggccaagcgcgtgatggccaaccacctgcgccgccga
gaaattgaacgcgcctatctggacacgctggcgctgcagcccgagccgctggcgccctcg
cccgaggaacgcgccatcgtgctggagacgctgtgcgagctggaccgcctgctcgacggc
ctgccgcccaaggtgcgcgcggcctttctgcacgcccagctggacggcatggcctatgcc
gagatcgcgttgctgctgcaggtctcggtcagctcggtcaagcagtacatggcgcgcgcc
atccggcattgctacttcccggaacatgcggcatga
DBGET
integrated database retrieval system
