Maridesulfovibrio hydrothermalis: DESAM_21562
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Entry
DESAM_21562 CDS
T02428
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
dhy
Maridesulfovibrio hydrothermalis
Pathway
dhy01501
beta-Lactam resistance
dhy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dhy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DESAM_21562
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DESAM_21562
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dhy02000
]
DESAM_21562
01504 Antimicrobial resistance genes [BR:
dhy01504
]
DESAM_21562
Transporters [BR:
dhy02000
]
Other transporters
Pores ion channels [TC:
1
]
DESAM_21562
Antimicrobial resistance genes [BR:
dhy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DESAM_21562
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
DESAM_21562
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
DESAM_21562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
P_T4SS_TraN
GP46
Motif
Other DBs
NCBI-ProteinID:
CCO23839
UniProt:
L0RAR1
LinkDB
All DBs
Position
1924441..1925928
Genome browser
AA seq
495 aa
AA seq
DB search
MPSYKLKFVTVCMLSIFSLSACSPFKPDPRDAMTLGVPMQYKLYSSEPRELGRWWEKFAD
ESLNKLVEEAVIADFDVRIAWAKLRQLRATAVKSRADLYPKLDGKASYNNARSGNDGTEG
TKGSTATDTHKLGLAASYELDLWGKIEAKSASGELNFLVSREDVNTAAMSVAAEVVNRWL
EIQMQRKKKEIYKKQLETNETYLELIELRFRNSLATALDVYQQRETVARTKALIPPVEAR
ELILLHELALLLGKPAGSIYVRTADFPDLPVMPGLGIPLDLLANRPDVRAAGLKLQSADW
AVTAARADRLPTVSLSAEAALSSAQLANIFSGWMTSLAASVVGPIFDGYSRKAEVERTRA
VVDERLLNYKEAVYKAFKEVQDSLVQEKWQHEYIRARKNQLAAARTNLEEAASRYLQGLE
DYLPVLNALVSVQNLEINIAEDEADLLTYRVSLYRALGGTWTDSITSPDELKPESDDQDA
VAAAEKLEKETVSAQ
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcttataaattaaaatttgtgactgtctgtatgctgtcaatatttagtctttcg
gcctgctccccttttaaacctgatcccagagatgccatgacgcttggtgtgcctatgcag
tataaattgtattcatccgagccgcgcgaactgggcagatggtgggaaaaatttgctgac
gagagccttaataagcttgttgaagaggctgtaattgcagattttgacgtgcgtatcgcc
tgggccaagctgcgtcagcttcgggcaacggcagttaaatcacgtgccgacctttatcct
aagcttgacggcaaagcttcatataataatgcccgttccggtaatgatggaacagaggga
accaaaggctcgactgcaactgatacgcataagcttggccttgctgcatcttacgaacta
gatctctggggtaaaattgaagcaaaatctgcttccggcgaacttaattttcttgtttcc
cgtgaggatgtaaataccgcggcaatgagcgttgctgccgaagttgtaaaccgctggctg
gagattcagatgcagcggaagaaaaaagaaatttataaaaaacagctggaaacaaacgaa
acctaccttgagcttatagagctgcgttttcgcaactcacttgcaacggctcttgatgtt
tatcagcagcgcgagactgttgcgcgaaccaaggcccttattcctccggttgaagcccgt
gaacttattttacttcatgaactggccctcctgcttggtaaacctgctggaagcatttat
gtgcggacagctgattttccggatctaccggtaatgcccggacttggaattcctcttgat
ttgcttgcaaacagacctgatgtgcgtgcggccggactgaaattacaatccgctgactgg
gccgttacagcggcgcgtgcggatcgtcttcctacagtaagtctttcagcagaggcggct
ttgagcagtgctcagcttgcaaatattttttccggctggatgacttcacttgcggcttct
gtcgtgggtcctatttttgatggatattctcgtaaggcagaagttgagcggaccagagct
gttgttgatgaaaggctgcttaattataaagaggccgtttataaggcttttaaagaagtg
caggactcgctggtgcaggaaaagtggcagcatgaatatatccgcgcccgtaaaaaccag
cttgctgcggcaaggacaaatctggaagaagcagcctcccgttatttgcagggccttgaa
gattatcttcctgttttgaatgctttggtaagtgttcagaatctggaaattaacattgca
gaagatgaagcggatctgcttacttatcgcgtatctctgtaccgggcgctgggcgggaca
tggacagattctataacttctcctgatgagcttaagccggaaagtgatgatcaggatgcc
gtggctgcggcggaaaaactcgaaaaagaaaccgtttctgcgcaataa
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