Solidesulfovibrio magneticus: DMR_02800
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Entry
DMR_02800 CDS
T00917
Symbol
holB
Name
(GenBank) putative DNA polymerase III delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
dma
Solidesulfovibrio magneticus
Pathway
dma03030
DNA replication
dma03430
Mismatch repair
dma03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DMR_02800 (holB)
03430 Mismatch repair
DMR_02800 (holB)
03440 Homologous recombination
DMR_02800 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dma03032
]
DMR_02800 (holB)
03400 DNA repair and recombination proteins [BR:
dma03400
]
DMR_02800 (holB)
Enzymes [BR:
dma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DMR_02800 (holB)
DNA replication proteins [BR:
dma03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DMR_02800 (holB)
DNA repair and recombination proteins [BR:
dma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DMR_02800 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
BAH73771
NITE:
DMR_02800
UniProt:
C4XGJ1
LinkDB
All DBs
Position
complement(305320..306183)
Genome browser
AA seq
287 aa
AA seq
DB search
MLAATDSLPYGVAPRQAQVLAGLDSLARAMPQALILEGGTADERAAMAMWLAARLNCGAH
QPPCGVCPVCIQIRDFVFKDLLYFDGGLETIKVADMREVRALVGEPPRGAGWRVVILAQA
QALTDEAANALLKAMEEPRPGNAFVLLTPQRERLFPTLVSRSFVLTLAWPDASRPLPAGG
EDDPWPIIDALYAFWRSGRGWFTGVKGRPSRLIAERVLTELARELAACLAGRTDTPLAGR
LAACGEPDVPRRLDLLLAECQEALVAQVNPAVVLDRLATRVYLWLRG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgctagctgccactgattcgttgccttacggcgtcgcgccgcgccaggcccaggtcctg
gccggcctggactccctggcccgggccatgccccaggcgctcatcctcgaaggcggcacg
gccgacgaacgcgcggccatggccatgtggctggcggcgcgtctcaactgcggcgcgcac
cagccgccctgcggcgtctgccccgtctgcatccagatccgcgacttcgtgttcaaggat
ttgctctatttcgacggcggcctggaaaccatcaaggtggccgacatgcgcgaggtgcgc
gcgcttgtcggcgaaccgccgcgcggagccggctggcgggtggtcatcctggcccaggcc
caggccctcaccgacgaggccgccaacgcgctgttaaaggccatggaggaacccaggccc
ggcaacgccttcgtgctgctgactccccagcgcgagcggctttttcccaccctggtgtcg
cgctccttcgtcctgaccctggcctggcccgacgcttcccggccgctgccggccggcggc
gaggacgatccctggcccatcatcgacgccctctacgccttctggcgctcgggacggggc
tggttcaccggcgtcaagggccggccgtcgcggctgatcgccgaacgggtcctgaccgaa
ctggcccgggagctggccgcctgcctggccggccggaccgacacgcccctggccggccgg
cttgccgcctgcggcgaacccgacgtgccccgccgcctcgatctgctcttggccgaatgc
caggaggcgctggttgcccaggtaaacccggccgtggtcctggatagactggccacccgc
gtttatctgtggcttcgcgggtag
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