Dichelobacter nodosus: DNO_1176
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Entry
DNO_1176 CDS
T00517
Symbol
ruvB
Name
(GenBank) holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
dno
Dichelobacter nodosus
Pathway
dno03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DNO_1176 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dno03400
]
DNO_1176 (ruvB)
Enzymes [BR:
dno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DNO_1176 (ruvB)
DNA repair and recombination proteins [BR:
dno03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DNO_1176 (ruvB)
RecFOR pathway proteins
DNO_1176 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_16
DUF815
nSTAND3
AAA_3
AAA_22
TIP49
IstB_IS21
AAA_2
AAA_14
Rad17
NB-ARC
AAA_24
AAA_18
NACHT
AAA_25
TsaE
AAA_17
AAA_33
PaRep2b
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
ABQ13510
UniProt:
A5EXH6
LinkDB
All DBs
Position
complement(1222406..1223422)
Genome browser
AA seq
338 aa
AA seq
DB search
MIESDRLVSGKARSEEQVIERAVRPKRLTDYVGQESLKAQLSIFIEAALKRQEALDHVLL
FGPPGLGKTTLAAIIAFELGVGLRQTSGPILDKAGDLAALLTNLEPHDVLFIDEIHRLSP
AVEEVLYPAMEDYQIDIMIGEGPAARSIKLDLPPFTLIGATTRSGLLTAPLRDRFGISHH
LQYYHHDELTQIVMRSAKLFEVAIDKEGAEEIGRRSRGTPRIANRLLRRVRDYAQVRGDG
MITKALADEALELLAVDHLGFDALDRRMLLCLVEYFGGGPTGIDTLAVSVGEERGTLEDV
VEPYLIQQGFIQRTPRGRVATELAYQYLNIEVPDGRNS
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgattgaatcggatcgtttagtcagcggaaaagcgcgttcagaagaacaagttattgag
cgcgccgtgcgcccaaagcgtttaaccgattacgtcgggcaagaatcgttaaaagcgcaa
ttaagcatttttattgaagccgcattaaaacgacaagaagcgctcgatcacgttttatta
tttggtcctcccggtttgggaaaaactacgcttgccgcaattatcgcgtttgaattaggc
gtgggtttgcggcaaacgtccggccctattttggataaagctggcgatttagccgcgtta
ttaacgaatttggagccgcacgatgtgttatttattgatgaaattcatcgattgtcgccg
gcggtagaagaagtgctttatcccgcgatggaagattatcaaatcgatattatgatcggc
gaaggtcctgccgcgcgttcgattaaattggatttaccgccgtttactttgatcggcgct
acaacgcgttctggattattaacggcgcctttgcgcgatcgctttggaattagtcatcat
ttgcagtattaccatcatgatgaattgacgcaaatcgtgatgcggtcggcgaaattattt
gaggtagcaattgataaagagggcgccgaagaaattgggcggcggtcacgcggtacgccg
agaattgctaatcgattattgcgccgtgtgcgcgattatgcgcaagtgcgcggcgatgga
atgattaccaaagcgctggctgatgaagctttagaattgttggcggtggatcatttgggt
tttgatgctttagatagacgtatgttgctgtgtttggtggaatattttggcggcggtcca
acaggaattgatactttagccgtgagcgtgggcgaggagcgcggcacgttagaagatgtg
gttgagccttatctcattcaacaaggatttattcaacgtaccccacgcggcagagtggca
accgaattggcttatcagtatttgaacatagaagttcctgacggcaggaatagttag
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