Diuraphis noxia (Russian wheat aphid): 107173640
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Entry
107173640 CDS
T04900
Name
(RefSeq) helicase ARIP4
KO
K10876
RAD54-like protein 2 [EC:5.6.2.-]
Organism
dnx
Diuraphis noxia (Russian wheat aphid)
Brite
KEGG Orthology (KO) [BR:
dnx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dnx03400
]
107173640
DNA repair and recombination proteins [BR:
dnx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
107173640
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
GBV-C_env
Motif
Other DBs
NCBI-GeneID:
107173640
NCBI-ProteinID:
XP_015379733
LinkDB
All DBs
Position
Unknown
AA seq
2227 aa
AA seq
DB search
MDPFNLSRYANLTVQRVQPPEEKPLPKAIENEEEEEDDCSDEEDDFSGSEEDTNKTPEIS
KTSDNSEVFNITATVDENVEVKLEIENIGNESENESNAKEQTDEEIEANSKRKSGEEEDD
QTPKKAKMNDDKTSDEDPDNQSTSEKRPTNLRRNIREVMDETKLDESTLAAQRQEMERLR
RVQEQQRIIRDVQKQIAINRQNSKAQDRVMSLLQGGTTSLIKKSSVPTEPQLQPKPNTIV
ISTDSGSPQIFNKKMLEILKNQPDASKECNEIDKLSSIASKLGDVNEPHMVTSSVSIAPI
KPAKVAEVVTISSESEEEEVERKPQSSDDDCILISGDEEEEDIADDDTHNSGMHTNDAYN
QPDESGRVLINVGHPDNEPDVFLAPQIARIIKPHQIGGVRFLFDNVVESLERFKSSKGFG
CILAHSMGLGKTLQVVSFCDVFLRHTPAKHVLCIMPINTLQNWMAEFNMWLPLPDDPKNS
SENTTNSGDIIYRQFPLFVLNDFHKTISARGKVIESWRVEGGVLLMGYELYRQLTSRKPR
KKRNKKQIDDDFYDEKNKPLLDEMRDALVKPGPDLVICDEGHRIKNSHASTSQSLKEIES
RRRVVLTGYPLQNNLLEYWCMVDFVRPNYLGTKTEFSNMFERPIQNGQCIDSTPQDIRLM
RHRAHVLHSLLEGFVQRRSHSVLEKTLPQKEEFVLLVRMTPLQRLLYDRFMNEVVRKKAV
PNPLKAFAVCCKIWNHPDILYYFLKKRSLDEAEIDLDLEEAGTPLGTPLGPTPATSPSAA
SKRSRNRWPKGGGLNPNPKELKNNPNRKNIKKDQIKTPAVATVMPNTSNNQLITPTTHNH
NTSTVTQSNQYDDYSSQPQQYGSQGNFTNQQLNNYNQNYDSSYWKEGGNFYRGNSEYYQS
NQGSETKNQYPYPQDPRLEVGEIRMVKSEPSYQNYEETSFSGSNDQNLYQNRGFNQDTTQ
GNQESEQPLSNQGFSPEVQKVNQGHFPTLGISQEIMPSQSISNIPRLQSDSIDQMSISKQ
KPKNVRNRKPNINNKQIQKNQSMIVANSGLHIDNNCNDNDSNLKNQLAISNSKDISFRQA
FNQGNSQEVLSNSNQELFTNNQDVLTNTNKGIFGSSSRINEDLQFNNSHTSLTESNKSIY
GSGLIKQGNDNGTGMAISFEGIFDNNRIITNHQKPNLNHQQVQNSIQTNINSQNINNSLS
NQSTLSHQSIQNRVTNHQIIDNPRLMNSNSVNQGMLLCDTNTQRQITSGQGAQHTHSMTI
SHKHQEMNQTFVNQQQQQLQHQQQQQQQQQQQQQQQQQQHQQQQQQQQQHHHHQHNQEQQ
QYQNSDNVLVNHGQIPIREPFMNPDNSSNNYNNYMLEPNQHISNQNHNYGTMLPDSSFQN
PNILSDQMLHDQEMLLANDQAMLSVLNSTTDANEQALLYNAMVGQPDGQSLLGLLEPPNM
LNNSQINEYQPVYGPLPSNVKPGLPGGAKTDPESNQYPRATNIQQITGRGVGLMSGAHNQ
NEVKMYSESNRFNVSNSNESYSRYSNYSSMYPPYTPGTSTPLGSISDILDNIPGPERTYQ
PPDRKNLASCTVTSQDVNPLPPFRSLDNKTKYEYGGTSNNSDIDQSHDXKSTSFSINKES
ISIEDTIDPKITTLEDGEIKNPSLLIKSGKEEPGIPYDWAVELFNDYVPGMIEASAKMSL
LFAIVEESVRIGDRVLLFSQSLFTLDLIEEFLQRNKIPGKDENWCRNCDYYRLDGSTSAS
EREKLINDFNICNTVHLFLVSTRAGSLGINLVGANRVIVFDASWNPCHDTQAVCRVYRYG
QQKPCFVYRLVTDNCLEKKIYDRQINKQVMADRVVDECNPDAHLSIKEVTNLCWDDGEST
PIKDFSSLKDNYSDVVIKYIVENLSSVLTKEPFQHESLFVDRKDKKLSQAEKRLAKRSYE
MEKKANTRPMYSYYGQNTTSSLYRNQMGKPMASVRPMQSMSNTSAVMASRNALNRRWIPA
EVWQKQGMSAQEMTLPLDVVIPTNAGDRGSIVLKAGQKVMVLKSPKGIYMQLESGKIIAI
RTSANNKPNNPTVTSQPFIPQQQSTHPASTMAYNRPQPLESSFNPGPKIDASMQQLRNRS
NLLRNNPSISITPKQIPPPSRSVQSPSYMPPTHSSAVVSQPASPAIPSSLYPPKLPSSIT
LTKFDRPHKSSEIGVQANSVASYGPRYPPEYPRSFDKYPIRNEYPPRLPQSYSNNYPPQY
HRPSSSQ
NT seq
6684 nt
NT seq
+upstream
nt +downstream
nt
atggatccatttaatttatcacgatacgccaatttaactgttcaaagggttcaaccacct
gaagaaaagccactgcctaaggctatagaaaatgaagaggaagaagaagatgactgtagc
gatgaagaagatgattttagtggtagcgaagaagatacgaacaagacaccagaaatttca
aagacttcagataattccgaagtatttaatattaccgcaacagttgatgaaaacgttgaa
gtcaaattagaaatagaaaacattggaaatgaatcagaaaacgagagcaatgccaaagaa
caaactgatgaagaaattgaagccaactctaaacggaaatctggggaggaagaagatgat
caaaccccgaaaaaagccaaaatgaatgacgacaaaaccagtgatgaagatccagataat
caatctacatccgaaaaacgaccaaccaatttgagacgaaatattcgtgaggttatggat
gaaacaaaattagatgaatcgaccttggctgcacaaagacaagaaatggaaagattacgt
cgggttcaagagcaacaacgtattattagagacgtccaaaaacaaattgcgatcaataga
caaaactctaaagctcaggatcgtgttatgtctttgcttcaaggaggaactacatcttta
attaaaaaaagttctgtacctactgaaccacaactccaacctaaacctaatactattgtg
atatctactgattctggatcgccacagatatttaataaaaaaatgttagaaatattaaaa
aatcaaccagatgcttctaaagaatgtaatgaaattgataaattatcatctattgcttca
aaacttggagatgttaatgaaccacacatggtaacatcttctgtttcaattgctccaata
aaaccagcaaaagtagctgaggttgtaacaataagtagtgaaagtgaagaagaggaagta
gaacgaaaacctcaaagttcagatgatgattgtatattaatatctggtgatgaagaagaa
gaagatatagcagatgatgatacacacaatagtggtatgcacacaaacgatgcttataat
caaccagatgagtctggacgagttcttataaatgttggtcatccagataatgagccagat
gttttcttagctcctcaaattgcacgtattatcaaacctcaccaaattggaggtgtaaga
tttttgtttgataatgtggtagaatctcttgaaaggtttaaatcttctaaaggatttggg
tgcatacttgcccattcaatgggattaggcaaaacactccaggttgtttcattttgtgat
gtttttttaagacatacaccagcaaaacatgtgttgtgtattatgcctattaatacttta
caaaattggatggctgaatttaatatgtggcttccgttacccgatgatcctaaaaattct
tcagaaaacacaacaaatagtggtgatattatttatagacagttccctctgtttgttctt
aatgattttcataagactatatcagctagaggcaaagttatagaaagctggcgagttgaa
ggtggtgttttactaatgggctatgagctttacagacaattaacttctaggaaaccaaga
aagaaacgaaataaaaaacaaattgatgatgatttttatgatgagaaaaataaaccattg
cttgatgaaatgagagatgcattagtaaaacctggaccagatttagtgatttgtgatgaa
ggacatagaattaaaaatagccatgcttcaacttcacaatctcttaaagagattgaaagt
cggcgacgtgttgtattaactggatatccattacaaaataacttactagaatattggtgt
atggtagattttgttcgtccaaattacttgggaacaaaaactgaattcagtaacatgttt
gaaagacctattcaaaatggtcaatgtattgacagtacaccccaagatattaggttgatg
agacacagagcacatgttctacattctcttttagaagggtttgttcaacgaagaagtcat
tctgtattggaaaaaacattaccacaaaaagaagaatttgttttacttgttcgtatgact
ccattacaacgattgctgtatgatcgatttatgaatgaagttgtacggaaaaaagctgta
cctaatccgttgaaagcatttgcagtttgttgtaaaatctggaatcatcctgacattcta
tactattttttgaaaaaacgttcattggatgaagctgaaattgatttagatctagaagaa
gctggtacacctttgggtacacctttaggacctaccccagcaacttctccatctgcagca
tcaaaacgatctagaaatcgatggccaaaaggaggaggattgaatcctaatcctaaagaa
ttaaaaaacaatccaaatcgcaagaacataaaaaaagatcaaataaaaactccggctgta
gcaacagttatgccaaatacgagcaataatcaacttattactcccactactcataatcac
aatacctcaactgttactcaatctaatcaatatgatgattattcctcacaaccacaacaa
tatggaagtcaggggaattttacaaatcaacaattgaacaattataatcaaaactatgat
tcttcttattggaaagaaggaggaaacttttatcgaggtaattcagaatattatcaatct
aatcaaggttcagaaacaaaaaatcaatatccataccctcaagatcctagactagaagtt
ggagaaattagaatggtaaaaagtgagccaagttatcaaaactatgaggaaaccagtttt
agtggttcaaatgatcaaaatctttatcaaaatcgtggatttaatcaagatactacacaa
ggaaatcaggaatctgaacaaccattatctaaccaagggttttctccagaagttcaaaaa
gtgaatcaaggtcattttccaactttgggaataagtcaagaaattatgccttctcaaagt
atttcaaacattccaagattgcaatcagatagtattgatcaaatgtcaatttcaaaacaa
aaaccaaaaaatgttcgaaatcgaaaacctaatataaataataaacaaatccaaaaaaat
caatcaatgattgtcgctaattcaggactacatattgataataattgtaatgataatgat
agcaacttaaaaaatcaactagctatatctaattctaaagatatatcatttagacaagca
tttaatcaaggaaatagccaagaagttctttctaatagcaatcaagagttgtttacaaac
aatcaagatgttttaactaatactaataaaggaatatttgggagctcttcaagaattaat
gaagatcttcaatttaataatagccatacatctttaacagaaagtaataaaagtatttat
gggagtggcttaataaagcagggaaacgacaatggtactggtatggctattagctttgag
ggtatatttgacaacaatcgaattattacaaatcatcagaaacccaacttgaatcatcaa
caagtgcaaaattctattcagaccaatatcaattcacagaatattaataacagcttaagt
aatcaaagtacgttaagccatcaatccattcaaaatcgagtaacaaatcatcaaataatt
gataaccctagattaatgaatagtaattctgttaaccaaggaatgttgttgtgtgatact
aatacccaaagacaaataacaagtggccaaggggctcaacatactcattcaatgactata
tcacacaaacatcaagaaatgaatcaaacatttgttaatcagcaacaacaacaattgcaa
caccaacaacaacagcaacagcaacagcaacagcaacagcaacaacaacaacaacaacat
caacaacaacaacaacaacaacaacaacatcatcatcatcaacataatcaagaacaacag
cagtatcaaaattcagataatgtactggtaaatcatggccagattccaattagggaacca
tttatgaaccccgataattcaagtaataactacaacaattatatgttagaacccaatcaa
catataagtaatcagaatcataattatggaactatgttacctgactcctcatttcaaaat
cccaatattttgtctgaccagatgttacatgaccaagaaatgttgttagctaatgatcaa
gcaatgttaagtgtactgaactctacaactgatgccaatgaacaggcactattgtataat
gctatggttggccagcctgatggacagagtttgcttggtcttttagagccgccaaacatg
ttgaacaacagtcaaattaatgaatatcaacccgtctatggtccattgccatctaatgta
aaacctgggttacctggaggtgctaaaacagatcctgaatctaatcaatatccaagagca
acaaatatacaacaaattactggaagaggtgttggtttaatgtctggagctcataatcaa
aatgaagtgaaaatgtattcagaatctaatcgtttcaatgtttcaaattctaatgaatct
tattcaagatattcaaattattcatctatgtaccctccatacactccaggtactagtact
ccattgggaagcatatctgatatactagataacatacctggacctgaacgtacatatcaa
ccacctgatcgaaagaatctagcatcttgcactgtgactagccaagatgtaaatccattg
ccaccatttcgttcattggacaataaaactaaatatgaatatggtggaactagcaataat
tcagacattgatcaatctcacgatgakaaaagtacttcattttctataaacaaagaatca
atatccatagaagataccattgatccaaaaataacaacgttggaggatggtgaaataaaa
aatccatcacttttaattaaaagtgggaaggaggaaccaggaataccatatgattgggct
gttgaattatttaatgattatgtacctggtatgattgaagcttcagcaaaaatgtcttta
ttatttgctattgttgaagaatctgttagaattggtgatcgtgttttattatttagccaa
tcgttgttcacattagacttgatagaagaatttttgcaacgaaataaaatacctggaaaa
gatgaaaattggtgtcgaaattgtgattattatcgtcttgatggcagtacctctgcatct
gaacgtgaaaagttaatcaacgatttcaacatctgtaatacagtccatttgtttttggta
tcaacgcgtgctggatcattaggcattaatcttgttggagcaaatagagtaattgtgttt
gatgcatcatggaatccctgtcatgatactcaagctgtatgcagagtttaccgatatggt
caacaaaaaccatgttttgtatacagattagtaacagataattgtttagaaaaaaaaatc
tatgatagacagattaacaaacaggtaatggcagatcgtgttgttgatgaatgcaatcca
gatgcccatttatctatcaaagaagtaactaatttatgttgggatgatggagagtctaca
ccaatcaaagatttttcatcattgaaagataattatagcgatgtagttataaaatatatt
gtggagaatctcagttctgtactaaccaaggaaccatttcaacacgaatcattgttcgtg
gaccgtaaagacaaaaaactatctcaggcagaaaaaaggttagccaaaaggagttatgaa
atggagaaaaaagcaaacactagacccatgtattcatattatggtcaaaatactacttct
tcattgtatagaaatcaaatgggtaaaccaatggctagtgtacgtccaatgcaatcaatg
tcaaatacatcagcagtcatggctagcagaaatgctctaaaccgtagatggataccagct
gaagtctggcaaaaacaaggaatgagtgctcaagaaatgactttacctcttgatgttgta
atccctacaaatgctggtgatcgtggttcaattgtactgaaagctggtcaaaaagtgatg
gtactaaaaagtcccaaaggaatttatatgcagttggaaagcggaaaaataattgcaatc
cgtacatcagcaaacaataaacctaataatccaacagtaactagccaaccattcatccct
caacaacaatctactcatcctgcttctacaatggcatataataggccacaaccactagaa
agtagttttaatccaggacccaaaattgatgcttctatgcaacaattacgaaaccgttca
aatttattaagaaataatcctagtatttcaataacgcctaagcaaataccgccaccttca
agatctgttcaatctccgtcatatatgccaccaactcattcatctgctgttgtttcacaa
cctgcatcrcctgccataccatcatcattataccctcccaaattaccttcttcaataaca
ttaacaaaatttgaccgacctcataartcatctgaaatcggtgtacaggccaattcagta
gccagttatggacctagatatccaccagagtatccaagatcatttgataagtatcctatt
agaaatgaataccccccaaggttgcctcaatcttatagtaataattatccaccgcaatat
caccgtccctcgtcttcgcaataa
DBGET
integrated database retrieval system