Desulfosudis oleivorans: Dole_0035
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Entry
Dole_0035 CDS
T00610
Name
(GenBank) SpoIID/LytB domain
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
dol
Desulfosudis oleivorans
Brite
KEGG Orthology (KO) [BR:
dol00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dol01011
]
Dole_0035
Enzymes [BR:
dol01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Dole_0035
Peptidoglycan biosynthesis and degradation proteins [BR:
dol01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Dole_0035
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIID
TPR_16
TPR_6
TPR_2
ANAPC3
YfiO
TPR_1
TPR_7
TPR_12
Motif
Other DBs
NCBI-ProteinID:
ABW65845
UniProt:
A8ZRS8
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All DBs
Position
41182..42708
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AA seq
508 aa
AA seq
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MWPVLLHAANGGLPAESDFLFAQAETQVAAGRYLEAIGLYQTVADTTPDAGEKARALLLV
GYAHAQYLDQHDKALLYFDYILTNWPGSAAAEEALYRKGMVLYETERYAKAYQAFTAYQE
RYPHTGRRYTAGVWAESAANLAATQALRMNRESLAAVRKDTTVRVLVAESADTVHLASGT
RLTLTDTASGKTSMLRSQATTIGAKQGRLTINGKSTATTRCRITSPQPIAVNGTRYRGAV
VVSADGGTVSAINHVDIEPYLYGVVPREMPASWPEQALMAQAVASRTYALYVKQKSADRS
FDVRATTASQVYGGYDAEMPAANRAVDATQGQVLTYNGNLIVAYFHANSGGYTECPENVW
GAALPYLADRPDRYSREVPGSQWEFFLPYDEAQAQLARYGVHVGGVRGFVFNGKSRSGRI
QDVSVVSDAGVWHMPGNMFRLAIGSTRLKSMCFEAARSDQGVLFRGAGYGHGVGMSQWGA
RTMALEGHDYKTILKHYYRNITIASLDR
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtggccggttctgctccacgcggccaacggcggccttccggcggaaagcgacttcctg
tttgcccaggccgaaacccaggtggcggcgggccggtacctggaagccatcggcctttac
cagaccgtggccgacaccaccccggacgccggggaaaaagcccgggcccttctgctggtg
ggatatgcccatgcccagtacctggatcagcacgacaaggccctgctctacttcgactac
attctgaccaactggcccggctctgcggcggccgaagaagccctctaccgaaagggcatg
gtgctttacgaaacagagcggtatgcaaaggcataccaggcgtttaccgcttatcaggaa
cgctatccccacaccggccggcgatacaccgccggggtctgggctgaaagcgccgcaaac
cttgcggccacccaggcgcttcgcatgaacagggagagccttgcagcggtccggaaagac
accactgtccgcgtgctggttgcagaatcggccgataccgtgcacctggcatcaggcacg
cggctgaccctcacggacacggcctccggaaaaacatcgatgctccggtcacaggcgacc
accattggtgccaaacagggccggctgacaatcaatggaaaatccactgccacgacccgg
tgccgcataacatcccctcagcccattgccgtaaacggcacccggtaccggggcgccgtg
gtggtgtcggccgatggcggaaccgtttcagcgatcaaccacgtggacattgagccctat
ctttacggcgtggtgccccgggagatgccggcctcctggccggaacaggctctcatggcc
caggccgtggcttcccgcacctatgccctttatgtaaaacagaaaagcgcggaccggtcc
tttgatgtccgggccaccacggcctcacaggtctacggcggatatgacgcggagatgccg
gcggccaatcgcgccgtggacgccactcaaggccaggtcctgacctacaacggcaacctg
atcgtggcctattttcatgccaacagcggggggtacactgaatgcccggaaaacgtctgg
ggcgcggcccttccctatttggcggaccggccggaccgctacagccgtgaggtgcccggg
agccaatgggaattttttctgccctatgacgaggcccaggcgcagctggcccggtacggg
gtgcacgtgggcggcgtcaggggctttgtattcaacggcaaaagccggtccggacggatt
caggatgtttcggtggtgtcggacgcaggggtatggcatatgccgggcaacatgttccgg
ctggccatcggcagcacccggctcaagagcatgtgctttgaagcggccagaagcgaccag
ggggtcctgtttcgcggcgccggatacggacacggcgtgggcatgagccagtggggggcc
agaaccatggccttggagggacatgactataaaaccatactgaagcactattaccggaac
atcaccatcgcctcccttgatcgttaa
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