KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os08t0538700-01
Entry
Os08t0538700-01   CDS       T02163                                 
Symbol
Os08g0538700
Name
(RAP-DB) Retinoblastoma-related protein.
  KO
K04681  retinoblastoma-like protein 1
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dosa03000]
    Os08t0538700-01 (Os08g0538700)
Transcription factors [BR:dosa03000]
 Eukaryotic type
  Other transcription factors
   Pocket domain Rb
    Os08t0538700-01 (Os08g0538700)
SSDB
Motif
Pfam: RB_A RB_B DUF3452 Rb_C
Other DBs
RAP-DB: Os08t0538700-01
LinkDB
Position
chr08:complement(join(26928005..26928121,26927147..26927251,26926905..26927032,26926720..26926816,26926559..26926605,26926142..26926334,26925972..26926038,26925680..26925862,26925380..26925573,26924421..26925297,26924190..26924325,26924032..26924104,26923714..26923890,26923461..26923580,26923237..26923372,26923040..26923152,26922795..26922910,26922548..26922701))
AA seq 1010 aa
MEGAAPPASSGSEVTGAGSGKVDAGGGAAMEERFADLCKSKLGLDESITRQAMQLFKESK
SILLSSMSSLGSGSPEEIERFWSAFVLYCVSRLGKAGKGKEDGGISLCQILRAFSLNIVD
FFKEMPQFCIKVGSVLAGLYGSDWEKRLELKELQANVVHLSLLSRYYKRAYQELFLLNDA
KPPENSAEPNAQASDYYRFGWLLFLVLRIQTFSRFKDLVTSTNGLVSVLAVLIVHIPVRL
RNFNIKESSSFAKKSDKGVNLIASLCEKYHTSEDELSKAIEKTNTLIVDILKKKPCPAAS
ECQQDRLSFIDPEGLTYFKNLLEEDSLKLSLLMLEKEYENAINTKGELDERMFANDEDSL
LGSGSLSGGAINLPGTKRKYDVMASPAKSITSPSPMSPPRFCASPTGNGYCSSKMAPITP
VSTAMTTAKWLRSTISPLPSKPSGELLRFFSACDKDVTDDITRRAGIILGAIFTSSSFGE
RICTSVRSTNRIDAIWTEQRKMEALKLYYRVLESMCRAETQILSGNNLTSLLSNERFHRC
MIACSAELVLATHKTVTMMFPAVLEKTGITAFDLSKVIESFVRHEDTLPRELKRHLNSLE
ERLLESMAWEKGSSMYNSLIVARPTLSAEINRLGLLAEPMPSLDAIAAHHNISLEGLPPL
PFQKQEHSPDKDEVRSPKRACTERRNVLVDNNSFRSPVKDTLKSKLPPLQSAFLSPTRPN
PAAGGELCAETGIGVFLSKIAKLAAIRIRGLCERLQLSQQVLERVYSLVQQIIIQQTALF
FNRHIDQIILCSIYGVAKISQLALTFKEIIFGYRKQSQCKPQVFRSVYVHWASRSRNGKT
GEDHVDIITFYNEVFIPTVKPLLVELGSGTSPNKKNEEKCAADGPYPESPRLSRFPNLPD
MSPKKVSAAHNVYVSPLRTSKMDTLLSPSSKSYYACVGESTHAFQSPSKDLKVINNRLNS
GKKVSGRLNFDVVSDLVVARSLSDQNSASAAATTADIATKTPVKLEQPDC
NT seq 3033 nt   +upstreamnt  +downstreamnt
atggagggtgccgcgccgccagcgagctccgggtcggaggtgacgggtgcgggctcgggg
aaggtggacgctggcggcggcgccgccatggaggagcggttcgccgatctgtgcaagagc
aagcttgggctggacgagagcataacgaggcaggcaatgcagctgttcaaggagagcaag
agcatcctcctatccagcatgtcatccttgggcagtggatcgcctgaggagatcgagagg
ttctggtctgcttttgttctttactgtgtgtcaaggcttggcaaagcaggcaaagggaag
gaagatggtggcatctcactgtgccagatattgagggcatttagtctgaacatcgtcgat
ttcttcaaggagatgccacagttctgcataaaggttgggtctgttctggctggtctatat
ggttcagattgggagaagaggcttgagttgaaggaactgcaagcgaatgtcgtccattta
agcctgctaagcaggtactacaagcgtgcctaccaggagctgttcctattaaatgatgcc
aagccaccagaaaattctgcagaaccaaatgcacaagcctctgactattatcgctttgga
tggttacttttcttggtgttaagaatccaaacattcagccgatttaaggatcttgttaca
tccacaaatggactagtttctgtgttggccgtacttattgttcacattcctgtgcggcta
aggaatttcaatatcaaagagtcttctagttttgccaagaagtcagacaagggagtaaat
cttattgcttccctatgtgaaaaataccatacatcagaagatgagttgagtaaagcaatc
gagaagacaaatactctcatagtggatattctgaagaagaaaccatgtccagctgcttca
gaatgtcagcaggataggttgtcttttattgatccagagggcttgacatattttaagaat
ttgctcgaggaagactcattgaaattaagtttgctaatgctggaaaaggaatatgagaat
gcaattaacaccaagggagaattagatgagcgcatgttcgcaaacgatgaggacagcttg
cttggcagtggaagtctgtcaggaggtgccatcaatttaccaggcacaaagagaaagtac
gatgttatggcctcacctgcaaaatcaataacaagtccaagtccgatgtctcctccacgg
ttttgtgcatcccctactggaaatggctactgcagctcaaaaatggctcctatcacccca
gtgagcacagccatgacaacagccaagtggcttcggagcacaatctctccccttccttca
aaaccttccggggagttactgcgcttcttctcagcttgtgataaggatgtgacagatgac
attacacgcagagctggtattatacttggagccatattcacaagcagttctttcggcgaa
cgtatatgtaccagcgtgcgaagcacaaacaggattgatgctatctggacagagcaaaga
aaaatggaagcacttaagctatattacagggttctggaatcaatgtgcagagcagagact
cagatcttgagtgggaacaatcttacatcgcttctgtctaatgagcgattccatcggtgt
atgattgcttgttctgctgagttagtgctggccactcacaagacagtcacaatgatgttc
ccagctgtgttagagaaaactggcataacagcttttgacttgagcaaagtcatagagagt
tttgttaggcatgaggatacacttccacgagagctgaaacgtcatttgaattcacttgag
gaacggctcctggaaagcatggcatgggagaaaggctcatcaatgtacaattctctgatt
gttgccaggccaacactatctgcagaaataaacaggctaggtttattggctgaaccaatg
ccatcacttgatgccattgcggcgcaccataacatttcactcgaggggctgccacctctt
ccctttcaaaagcaagaacattcaccagacaaggatgaagttagatctcccaaaagagca
tgcactgaaaggaggaatgtgctggtggacaacaattcatttagatcaccagtcaaggat
accctcaaatcaaagttgcctcctctccaatcagcatttttaagtccaacaagacctaat
cctgcagcagggggagaattatgcgcagagacaggaataggtgtatttttgagcaagata
gcaaagcttgcagctattagaatcagaggtctttgtgaaaggctgcaactttctcagcaa
gtcttggagcgagtgtactcccttgtgcaacaaatcattatccaacaaactgctctattt
ttcaatcggcacatcgatcagattatactatgcagcatatatggagttgctaagatatct
caattggcactgacattcaaggaaattattttcggctacagaaaacaatctcagtgcaag
ccacaagttttccgtagtgtttatgttcattgggcatcacgaagccgcaatgggaaaaca
ggggaggaccatgttgacattatcactttctacaacgaagtatttattcctactgtgaaa
cctttgctggttgagctagggtctggtactagtccaaacaagaagaatgaggaaaaatgt
gctgctgatggtccatatccagaatctcctcggctatctcggtttccaaaccttcctgac
atgtctcccaagaaagtttctgctgctcataacgtatatgtttcacccttgcgcacatca
aagatggatactttgctttccccaagctccaagagctattacgcctgtgtaggggagagt
actcatgcatttcagagcccctccaaggaccttaaggttataaacaaccgcctaaacagt
gggaagaaagtcagtggaagactgaactttgatgttgtcagtgatttggttgttgccaga
agtctcagcgatcaaaatagcgcatcagcagcagcaacaacagcagatatcgccacaaaa
acaccagtgaaattggagcagccagactgctag

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