KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os12t0554400-01
Entry
Os12t0554400-01   CDS       T02163                                 
Symbol
Os12g0554400
Name
(RAP-DB) Tetratricopeptide-like helical domain containing protein.
  KO
K20307  trafficking protein particle complex subunit 10
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dosa04131]
    Os12t0554400-01 (Os12g0554400)
Membrane trafficking [BR:dosa04131]
 Endosome - Golgi transport
  Tethering complex
   TRAPP complex II
    Os12t0554400-01 (Os12g0554400)
SSDB
Motif
Pfam: TRAPPC10 Foie-gras_1 bL31_N
Other DBs
RAP-DB: Os12t0554400-01
LinkDB
Position
chr12:complement(join(22528981..22529044,22528216..22528445,22527915..22528096,22527484..22527667,22527266..22527356,22526414..22526574,22525752..22525841,22525489..22525650,22524205..22524266,22523932..22524022,22523266..22523417,22522931..22523147,22522232..22522777,22521816..22522028,22521268..22521652,22521051..22521141,22520858..22520942,22520570..22520753,22519834..22520114,22519580..22519670,22519278..22519453))
AA seq 1245 aa
MANYLAQFQTIKSSCDRIVVAVEDVSDLWLNVKESFEQRLPVKKACLNNKARNPVFVENL
PAEFIQTTDSRLRSRFPQDQYLFWFREPYATVVLVSCEDLDEFKTILKPRLKLIVQNDER
EWFIVFVSKAHPSNDQASKMAKRVYARLESDFNTKKRERCCKFDLHGPDAEFWDDFDSKM
VDCIRNTLDRRVQFYEEEIRRLSEQRFTPIWNFCNFFILKESLAFMFEMTNLHEDSLREY
DELELCYSESVNSPGKHREFGGLDTGDDQAALLNPGFKALTQIVQDDVFREFEFRQYIFA
CQAKLLFKLHRPIEVAARGYAFVVSFSKTLALQENGLPFCFREVWVITACMDLIKATTSH
YDGTAVAIDSEREFCRIQGDLYSLCRIKFLRLAYLIGYGVEIEKSPVNSASLSMLPWPKP
ATWPSIPPDSSAETMAKEKMILQAKSREKIFNIHRKPLPLEPSLLLREANRRRAFLSVGN
ISELYDSGDGSGLDANSKPSPNKSASNYMARTMSGPATSETSLPVDRPMRLSEIHVAAEH
ALKQTVSDPNFMTSLSSLEEFEKRYMELTKGAADNYHHSWWKRHGVVLDGEIAALFFKHE
NYDLAAKSYEKVCALYSAEGWEELLADVLPDLAECQKILNDEAGYLTSCVKLLSLESGLF
SSKERQAFQSEVVRLAHSEMKHPVPLDVSSLITFAGNPAPPLELCDGDPGTLSVAVWSAF
PDDITLESLSLRLSASSSADEGLKAIKSSDARVLVPGRNIITFDIPPQKPGSYVLGALTG
QIGKLSFRSHGFSQDGPVDTDEFMSFEKPTRPVLKVRKPRALVDITPAVSSALLMNELQW
IGLIVKPIDYSLKDGILHIDAGAGLKIEESQMIEIETYGSDVEHVGGTDASKTSSSSTDT
RKVEKVPIEDGKIKIPDWASDVTTLVWFPVRAIDDTIARGASPASPQKQSIVDGMRMIAL
KLEFGVFLNQVFERTIAVHFTNPFHVSTRVVDKCYDGTLLLQVILHSEVKATLHVKDIWL
DLQSGFEHTGKGDGRPTSNLFPLVIAPSSRAGILFVIRLSALGDMDELEKADSMLNIKYG
ISGDRTTGAHSPVPVKPDDSEELVFKIAVKMKRPVLDPCVAVGFLPFSSDCLRVGQLVNM
RWRVERLKNPEDASLLADEILYQVDANPQNWMVAGRKCGHVSLSNKQGSRIEITVTCVPL
VSGYVHPPQLGLPHVGEANISCNPAGPHLVCVLPPTLSTSYCIPA
NT seq 3738 nt   +upstreamnt  +downstreamnt
atggcgaactacctcgcgcagttccagaccatcaagtcctcctgcgaccgcatcgtcgtc
gccgttgaagatgtgagtgacttgtggctcaatgtgaaagaaagtttcgagcaacgctta
ccagtgaagaaggcctgcctcaataacaaggcgaggaatcctgtttttgtggaaaaccta
ccagctgagtttatacagaccactgattcgaggctacgtagtcgatttccacaagatcaa
tacttgttttggttccgggaaccatatgcaactgttgttcttgtcagttgcgaggatctt
gatgagttcaagaccattcttaagcctcgcctcaaattgattgtgcaaaatgatgagagg
gaatggttcattgtatttgtgtctaaggcccatcctagcaatgaccaagcatctaagatg
gcaaagagagtatatgctaggcttgagagcgatttcaacactaaaaaaagagaaagatgc
tgtaaatttgatctccatggacctgatgcggaattctgggatgattttgactccaaaatg
gtggactgcattagaaacacattggataggcgggttcaattttatgaagaggaaattcgc
aggttaagtgagcagagattcactccgatatggaacttctgcaacttttttattcttaag
gaaagcttggctttcatgtttgagatgactaatcttcatgaagattcactccgtgaatac
gacgagcttgaactatgctactcagaatcagttaattctcctggaaaacatcgagaattt
ggaggattggatactggtgatgatcaagcggcgctgctaaatccaggatttaaagcattg
acccaaattgtccaggatgatgtgttcagagaatttgagtttagacaatacatatttgct
tgccaggctaagttattgtttaaattgcatcgcccaattgaggttgctgcaagaggatat
gcttttgtggttagcttttccaagacgctagccttgcaggagaatggtctaccattttgt
tttcgtgaagtatgggtgataactgcatgtatggatttaataaaagcaacaacctcacac
tatgatggtacagctgttgctatcgactcagagagggagttctgtcgtattcagggtgac
ctctattctctgtgccgtattaagtttctgaggcttgcttatttgattggttatggagtt
gagatagaaaaaagtccagtcaacagtgcatctttaagcatgctaccatggccaaagcca
gctacatggccttctattccaccggattcatcagcagaaacaatggcaaaggagaagatg
attctccaagcaaaatcaagagaaaagatcttcaatattcacaggaaaccactgccatta
gaaccttctttgcttcttcgtgaggctaataggcgtagggcttttctttctgttggaaat
atatctgaattatatgattcaggtgatggttcaggtctggatgcaaattcaaaaccttcg
cccaacaaatctgcttcgaactacatggccaggacaatgtcagggccagcgacatctgag
acttctctgccagttgatcgccccatgaggttgtcagaaattcatgttgcagctgagcat
gcactgaagcagacagtatctgaccctaattttatgacatcactttcatcactagaagaa
tttgagaaaagatatatggagcttactaaaggcgcagctgacaattatcatcactcttgg
tggaaaagacatggagttgtgctagatggagaaattgcagctctattctttaagcatgaa
aattatgatttggctgcaaagtcctatgagaaagtttgtgctctctattctgcagaaggc
tgggaagagctgttggcagatgttcttcctgatcttgcagaatgccagaagattctcaat
gatgaagctggttatttgacttcctgtgtgaagttactttctctagagagtggcttattt
tcatctaaagagcggcaagctttccagtcagaggttgttcggcttgctcacagtgaaatg
aagcatcctgtgccccttgatgtctcatcacttattacatttgctggaaatcctgctcca
ccactagagttgtgtgatggagatcctggtacactatctgtagctgtttggagtgccttc
ccggatgacatcacactcgagtctctcagcttaagattgtcggcttcctctagtgcagat
gaaggtcttaaggcgataaagagttcagatgctcgagttcttgtacccggtagaaatatc
atcaccttcgacattcctcctcaaaagcctggatcctatgtgttgggtgctctgacgggc
cagattggcaagctatcattcagatcgcatggattttctcaagatggtccagtggacact
gatgaattcatgagctttgagaagccaacaaggcctgttttgaaggtgagaaaaccaagg
gctttagttgatattactcctgctgtgtcctctgcattgcttatgaatgaacttcagtgg
attgggttaattgtcaagccaatagactattctttgaaagatggcatattgcatatagat
gcgggtgctggactgaaaattgaggagtcccagatgattgagatagaaacttatggaagt
gatgtggagcatgttggtggtactgatgcttccaagacatcatcaagctccactgatact
cgtaaggttgagaaggtccctattgaagatgggaagataaaaataccagactgggctagt
gatgtgactactcttgtatggtttcctgttcgtgctattgatgatacaattgcaaggggt
gcatcgccagcatcccctcagaaacagagcatagtagatgggatgagaatgattgctctc
aagcttgaatttggagtttttcttaatcaagtgtttgaaaggactatcgcagtacatttc
actaacccattccatgtgagcacacgcgtagtagataagtgctatgatggaactctacta
ctgcaggtgatattgcattctgaagtgaaggccactctgcatgtaaaggatatatggttg
gatctgcaatctggatttgaacacacaggaaagggagatggacgaccaacttcgaacttg
ttccctctggttattgctccttcttcgagagctggaatcttatttgtaatacgtttaagt
gccttaggagatatggatgagctagaaaaggcagatagcatgttgaatattaagtatgga
atatccggtgacagaacaactggagcacactctccagttcctgttaaacctgatgattct
gaggagcttgtattcaagattgcggtgaagatgaagcgccctgtcctggacccatgtgtg
gcagttgggttccttccgttttcttcggactgcttgagggttggccagctggtcaacatg
agatggagggttgaaaggctgaagaacccggaggatgcctctctgttagccgacgaaata
ctttatcaagtcgacgccaacccacagaactggatggttgctgggaggaaatgcggtcac
gtatcgctgtcaaacaaacaaggttcaaggatagagatcacggtgacgtgcgtgccgctg
gtgtccggctacgtccatccgccgcagctgggcctgccgcacgtcggcgaggccaacatc
agctgcaacccggcaggccctcacctggtgtgcgtccttcctccgacactgagcacctca
tactgcataccggcttga

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