Desulfovibrio piger: DESPIGER_2018
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Entry
DESPIGER_2018 CDS
T04638
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
dpg
Desulfovibrio piger
Brite
KEGG Orthology (KO) [BR:
dpg00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
DESPIGER_2018
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Gene cluster
GFIT
Motif
Pfam:
DEAD
MZB
Helicase_C
RNase_H_2
DNA_pol_B_exo2
ResIII
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
SFV73842
UniProt:
A0A1K1LGL7
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All DBs
Position
I:2152170..2155592
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AA seq
1140 aa
AA seq
DB search
MGVAEYVRALLASDTLGPQVRHHRCESARAAVYAESRLPWPAAIRRTLEERGLSGLYSHQ
ALATDHIRAGHSVVVATPTASGKSLIYNLPVLERHLRDSEARALYLFPLKALAQDQLAGL
QRLVSGWPEEARPTAALYDGDTSDHFRRKIRRDPPTVLISNPEMLHLALLPHHEQWAPFL
AGLSHIVVDEAHTYRGVFGAHMAGVFRRLNRLAAHYGAAPSYVFCTATVGNPGELAASLS
GLDLLPGRRPPVVVDQSGAPQGARHYVFLDPDQSPATAAIDLLRAALARKLRTIVYCRSR
RMTELVSLWAGSLSGPWAGRISAYRAGFLPEERRQIEARMASGELLAVVSTSALELGIDI
GGLDVCILVGYPGTIMSTLQRGGRVGRAQQESAVVLVAGEDALDQYFMSHPEDFFSRPAE
KAVVNPWNEVILARHLECAAAELPLSARDPWLAPAPAQEALRDLAARGRLLLSADGSQWL
AARKRPQRLVDLRGTGRSFVIEDSEGTVIGSVDGFRAWRETHAGAVYLHRGRSYVIEEMD
PAAGRVRARQAKVDWFTRVRGHKSTDILEELERRPLGRGVVCRGRLRIIDTITGYEKRST
RDNRLLTIVPLEAPPQIFETEGLWYVIPESCRRRLEEDFVHFMGSIHACEHTAIGMLPLL
VMADRNDFGGISIPLHPQTGLACVFIYDGLPGGAGLTRQAFGHARELLEVCAAVIEACPC
EDGCPSCVHSPKCGSGNRPISKAGALRLIRDLLAPGADAEGEALCADLRISPPPELLPPR
PVDEPAAPVPPPVPDMAAIMAAWAGQSSAAAPAVPAGQAGQGPRTDIAGAGKGEAAPPGD
MPPQDGPIEGGGGEACADGGSPQDGPSAAAGKLLGKRATCPAAAAGMAGYRAVGGAGHPD
DQGASPRPVSPAAGRKTGGATAAAARPAAQRPEPTAPAVSAGGAGSTRVRPGPGVGALGR
PPEQYLVFDVETRRSAAEVGGWNRADRMGVSIAVAYDSRADDFFTYTQEALPELFARMRA
AQLVVGFNSFRFDYAVLSAFAPFDLRALPGLDLLRRVQDSLKYRVSLDNLGQATLGEPKS
ADGLQALRWWQEGRLDDIAAYCRKDVDLTRRLYLFGLEHGWLLFTNKAGQRVRVPVDFRQ
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttgctgaatatgtccgggccctgctggcctcggacacgctggggccgcaggtg
cggcaccaccgctgcgagtccgcgcgtgcggccgtgtacgcggaaagccgcctgccctgg
cccgcggccatccggcgcacgctggaggaacgcggcctgagcggcctttacagccaccag
gccctggccacggaccacatccgcgccgggcattccgtggtggtggccacgcccacggcc
agcggcaagagcctgatctacaacctgccggtgctggaacgccatctgcgtgacagcgag
gcccgcgccctctatcttttcccgctcaaggccctggcccaggaccagctggccgggctg
caacgcctggtctccggctggcccgaagaggcccggcccacggccgccctctacgacggc
gacaccagcgaccatttccggcgcaagatccgccgcgacccgcccacggtgctcatcagc
aatcccgagatgctgcacctggccctgctgccgcaccatgagcagtgggcccccttcctg
gccgggctctcccacatcgtggtggacgaggcccacacctaccgcggcgtgttcggcgcg
catatggcgggcgtgttccgccgcctcaaccggctggccgcccattacggcgccgcgccg
tcctatgtgttctgcacggccacggtgggcaatcccggcgagctggccgcatcgctctcc
ggcctcgacctgctgcccggccgccggccgcccgtggtggtggaccagtccggcgcgccg
cagggcgcacggcattacgtcttcctcgatcccgaccagagcccggccacggcggccatc
gacctgctgcgggccgcgctggcgcgcaagctgcgcaccatcgtctactgccgttcccgc
cgcatgaccgaactggtcagcctgtgggccgggagcctttccgggccgtgggcgggccgc
atctccgcctatcgcgcgggatttttgcccgaggaacgccgccagatcgaggcccgcatg
gcctcgggcgagctgctggccgtggtcagcaccagcgccctggagctgggcatcgacatc
ggcgggctggatgtctgcattctggtgggctatccgggcaccatcatgtccaccctgcaa
cggggcgggcgcgtgggccgggcacagcaggaatcggccgtggtgctggtggcgggcgag
gacgcgctggaccagtatttcatgagccatcccgaagactttttcagccgcccggcggaa
aaggccgtggtcaatccctggaacgaggtcatcctggcccggcatctggagtgcgcggcc
gccgagctgcccctgtccgcccgcgatccctggctggccccggccccggcgcaggaggcc
ctgcgtgatctggcggcccggggacgcctgctgctctccgccgacggcagccagtggctg
gccgcccgcaagcggccgcagcggctggtggacctgcgcgggacgggccggagcttcgtc
atcgaggacagcgagggcacggtcatcggttccgtggacggcttccgggcctggcgcgag
acccatgcgggcgcggtctacctgcaccggggccgcagctatgtcatcgaggagatggac
ccggcggcgggccgggtgcgggcccgtcaggccaaagtggactggttcacgcgggtgcgc
ggccacaagagcacggacatccttgaggagctggagcgccgccccctggggcgcggcgtg
gtctgccgggggcggctgcgcatcatcgacaccatcaccggctacgagaagcgcagcacg
cgcgacaaccgcctgctgaccatcgtgccgctggaagcgccgccgcagatcttcgagacc
gagggcctgtggtacgtcatccccgagagctgccgccggcgtctggaagaggatttcgtg
catttcatgggctccatccatgcctgcgagcatacggccatcggcatgctgcccctgctg
gtcatggccgaccgcaacgatttcggcggcatctccatcccgctccatccccagaccggc
ctggcctgcgtcttcatctatgacggcctgcccggcggcgcgggcctgacgcgccaggcc
ttcggccatgcccgcgagctgctggaggtctgcgcggcggtcatcgaggcctgcccctgc
gaggacggctgcccctcctgcgtgcattcgcccaagtgcggttcgggcaaccggcccatc
agcaaggccggggccctgcgcctgatccgcgacctgctggcgcccggagcggatgccgag
ggcgaggccctgtgcgccgacctgcgcatcagtccgccgccggaactgctgccgccccgg
cccgtggacgagcccgcggccccggtgccgccgcccgtgccggacatggcggccatcatg
gcggcctgggccgggcagtcctccgctgcggccccggcggtacctgcggggcaggccggg
caggggccccggacagacatcgccggcgccgggaagggggaggccgcgcccccgggagac
atgcctccgcaggacgggcctatcgagggcggcgggggagaggcttgcgcggatggcggc
agcccgcaggatgggccgtccgccgcagccgggaagcttttgggcaaacgggccacctgc
ccggccgcagctgcgggaatggccggatacagggctgtgggcggcgcgggacacccggac
gatcagggggcttccccgcgtcccgtatccccggcggcaggacggaagaccggcggggcc
acggcagcggccgcccgtccggcggcgcaaaggccggagcccacggctcccgccgtgtct
gccggtggcgcgggcagcacccgggtccgccccgggcccggtgtgggcgcgctgggcagg
ccgccggaacagtatctggtcttcgacgtggagacccggcgcagcgccgccgaggtgggc
ggctggaacagggccgaccgcatgggcgtgagcatcgccgtggcctatgacagccgggcc
gacgatttcttcacctacacgcaggaggccctgccggagctctttgcccgcatgcgggcc
gcgcagctggtggtgggcttcaattccttccgtttcgactacgcggtgctttcggccttc
gcgcccttcgatctgcgggccctgccgggccttgacctcttgcgccgggtgcaggacagt
ctcaagtaccgggtgtccctggacaatctggggcaggcgaccctgggcgagcccaagagc
gccgacggcctgcaggccctgcgctggtggcaggaagggcggctggacgacatcgccgcc
tactgccgcaaggacgtggacctgacgcggcggctctatctgttcgggctggaacacggc
tggttgcttttcaccaacaaggccgggcagcgcgtgcgcgtgcccgtggatttcaggcag
tga
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