Pseudodesulfovibrio piezophilus: BN4_20493
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Entry
BN4_20493 CDS
T02481
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dpi
Pseudodesulfovibrio piezophilus
Pathway
dpi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dpi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BN4_20493 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpi03021
]
BN4_20493 (rpoA)
03400 DNA repair and recombination proteins [BR:
dpi03400
]
BN4_20493 (rpoA)
Enzymes [BR:
dpi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BN4_20493 (rpoA)
Transcription machinery [BR:
dpi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BN4_20493 (rpoA)
DNA repair and recombination proteins [BR:
dpi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BN4_20493 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
CCH50555
UniProt:
M1WNS6
LinkDB
All DBs
Position
3606531..3607571
Genome browser
AA seq
346 aa
AA seq
DB search
MLIENGDKLINTRNWSELVKPEKLARDPKSGENYGKFICEPLERGYATTIGNAMRRVLLS
SMQGCAIVAASIEGVQHEFTTMPGVLEDMTEVVLNLKQVRIAMTTDEPQRLLLEANKKGQ
VTAGMIQENQNVKVLNSDQLIATLTENRPLKMELEVRMGKGYVPADMHEGLADEIGSIIL
DASYSPVKKVAYSVEQARVGQMTNYDKLILEVWTDGSVSPEDACAYSAKILKDQLSVFIN
FDELSSEAAEEEEDAIDLNPNLFKSIDELELSVRATNCLKAANIQLVGELVQRTEQSMLK
TKNFGRKSLDEIRRVLDSMTLKFGMIVEDFDKKYQEWMKRKEKNEA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgcttattgagaacggcgacaaactcatcaacacccgcaactggagtgaactggttaaa
cccgaaaagctcgctcgcgatccaaagtccggcgaaaattacgggaagttcatctgtgaa
cccctggagcgcggctatgccactactataggcaacgccatgcgcagggtccttctgtcc
tctatgcaggggtgtgccattgttgccgcctccatagaaggcgtgcagcacgagttcacg
accatgcctggggttttggaagacatgactgaggtggtgctcaacctgaagcaggttcgt
atcgctatgaccacagatgagccccaacgtctccttctcgaggcgaataaaaagggccag
gtcactgccggaatgatccaggaaaatcagaatgtcaaagttctgaattctgaccagctt
atcgccaccctgacagaaaaccgtcccctgaagatggagcttgaggtgcgtatgggcaaa
gggtatgtccctgctgatatgcatgaaggccttgccgatgaaatcggttccatcattctg
gatgcgagctattctccggttaaaaaagtagcatactccgttgaacaggctcgtgtcggt
cagatgacaaactatgataaattgatcctcgaagtgtggacagacggttctgtctctcct
gaggatgcctgtgcatatagcgccaaaatcctgaaagatcagctttccgtgttcattaat
tttgatgaactttcctctgaagctgcagaggaagaggaagatgccattgatctgaacccg
aacctcttcaagtcaattgatgaacttgaactttccgttcgtgccaccaattgtctgaag
gctgccaatattcaacttgttggtgaactggttcaacgtactgaacagagcatgctcaaa
accaagaacttcggtaggaaatcactcgatgagatccgtcgagtccttgacagcatgact
cttaagtttggtatgatcgttgaggattttgacaagaaataccaggaatggatgaagagg
aaagagaaaaatgaggcatag
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