Desulfobulbus propionicus: Despr_2740
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Entry
Despr_2740 CDS
T01413
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
dpr
Desulfobulbus propionicus
Pathway
dpr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dpr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Despr_2740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpr03400
]
Despr_2740
Enzymes [BR:
dpr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Despr_2740
DNA repair and recombination proteins [BR:
dpr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Despr_2740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
RecD_N
AAA_11
Helicase_RecD
UvrD-helicase
SH3_13
AAA_22
SLFN-g3_helicase
nSTAND3
UvrD_C
DEAD
PIF1
Mg_chelatase
T2SSE
AAA_16
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
ADW18875
UniProt:
A0A7U3YNY8
LinkDB
All DBs
Position
complement(3154032..3155894)
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AA seq
620 aa
AA seq
DB search
MNPAHLLDFLLAGHWLRPIDVQAAQLLERIDQGCCPQLLLAAAFASWATGQGHTCLPLSV
LPELLAAAGVDNAAYRDSGQLRVQLLRSTVVGAPGDLRPLILDADNHLFLHRLYRDETVI
ARALSRRAAGIEAVDQRAALPLVEALFPESKGAVEVDWQRAAAVLALHKRLVIISGGPGT
GKTYTVARMLALLIALTPTKPRIALAAPTGKAALRLRESIRRAKDALPPLLATPIPEQAQ
TLHRLLGVHHDRPGFRHHGANPLHLDLLILDEASMIDVPLMAALLAALPAACRVILLGDR
DQLASVEAGNLFGDLCGEGAAGWSARLIRHMRGLLGPRQMPASVPLASSLGDCLVLLHTS
RRFHEGSGIGTLARAVNSGAPEAVAAILDAAPPDLHIEETHGAAQTPWLRDQIAQCFLPL
FAADTPLNALRALGQRRILCALREGPGGVEGINRLAETIFRRLGRIATMERFYRGMPILI
QRNDYGLGLFNGDTGILWPDDQGRLQAWFAEENGEVRPVSLARLPSWQVSYAITVHKAQG
SEFDEVLLLLPQEDAPVLSRELLYTGITRARRRFSLFGPRALLLRAVRRRLVRYSGLAGI
VARIGGHPPGEEATRAGAGD
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgaacccagcgcatctccttgacttcctgctcgccggccattggttgcggcccattgat
gtccaggcggcccagttgttggaacggatcgatcagggttgctgcccgcaactactcctg
gccgccgcctttgccagctgggcaaccggacagggccacacctgtctgcccctgtccgtc
ctgccggagcttctggcggcggcaggcgtggacaacgccgcctatcgggacagcggacag
ctgcgcgtgcagttgctgcgctccaccgtggttggcgcgcccggcgatcttcggcccctg
attctggatgcggacaatcatctctttcttcaccgtttgtaccgggacgagacggtcatc
gcccgcgccctgagccggcgggccgccggcatcgaggccgtggaccagagggcggccctg
cccctggtcgaggccctctttcccgaaagcaagggggcggtcgaggtggactggcagcgg
gcagcggcggttctggcgctccataaacggctggtgatcatttccgggggaccgggaacc
ggcaagacctacaccgtggcccggatgctcgccctgctgattgccctgacgccaaccaag
ccgcgtatcgccctggccgctcccaccggcaaggcggcgctcaggctcagggaatccatt
cgccgcgccaaggacgccttgccccccttgctggcgacgccgattcccgaacaggcccag
accctgcaccggctgctcggcgtgcatcacgaccgtcccggtttccgccaccatggggcc
aatccgctccaccttgatctgttgatcctggatgaggcctcgatgatcgacgtgccgctg
atggccgccctgctcgccgccctgccggccgcctgccgggtgattctcctcggcgaccgt
gatcagctggcctcggtggaggcgggtaacctgtttggcgatttgtgcggggaaggggct
gcgggctggtcggcaaggctgattcggcacatgcgggggctgctcggaccgaggcagatg
cctgcctccgtccccttggcctcgtccctgggcgattgcctggtgttgctgcacaccagc
cgtcgctttcatgaaggctccggcatcggtaccctggcgcgggcagtcaacagcggcgcg
cccgaggccgtggccgcgattctggatgccgccccgccggatctccacatcgaggaaacc
catggggcggcccagaccccctggctgcgcgaccagatcgcgcaatgcttcctgccgctg
tttgccgccgacacaccgctgaacgccttgcgggcgcttggacaacgccgcatcctctgt
gccctgcgcgaggggccgggcggggtggaaggcatcaaccggctggcggagacgatcttt
cgccgcctggggcgtatcgcaacgatggaacggttctatcgcggcatgccgatcctcatc
cagcgcaacgattatgggttagggctgttcaacggcgacaccggcatcctctggcccgac
gaccagggcaggttgcaggcctggttcgccgaggaaaacggcgaggtccggccggtcagc
ctggcccgtctgccaagttggcaggtttcctacgccatcaccgtgcacaaggcgcaggga
tcggagttcgacgaggtgctgctgctccttccccaggaggatgcaccggtcctcagccgg
gaactgctgtacaccggcatcacccgagcgcggcgacggttctccctgtttggcccgcgc
gccttgctgctgcgcgcggtccggcggcggctggtgcgctattccggtctggcggggatc
gtggcccgcatcggagggcacccaccgggcgaggaggcgacacgagccggagcaggcgac
tga
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