Desulfotalea psychrophila: DP2416
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Entry
DP2416 CDS
T00192
Name
(GenBank) probable exodeoxyribonuclease (ExoA)
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
dps
Desulfotalea psychrophila
Pathway
dps03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DP2416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dps03400
]
DP2416
Enzymes [BR:
dps01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
DP2416
DNA repair and recombination proteins [BR:
dps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
DP2416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
HhH-GPD
HHH
Exo_endo_phos_2
HHH_8
RecR_HhH
HHH_5
EndIII_4Fe-2S
PPTA
Motif
Other DBs
NCBI-ProteinID:
CAG37145
UniProt:
Q6AKI0
LinkDB
All DBs
Position
2758766..2760208
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AA seq
480 aa
AA seq
DB search
MGIDIGHFLTEVKKATRGQALPVVDLIAVQTEDPFKVLVATILSARTKDETTAASSKRLF
ARAQTAEELTELSEEELQKLIYPVGFYKNKAGYLKKLPEALKEFKGVVPETMTELLRLPG
VGRKTANLVLSIAFKKPAICVDTHVHRIMNIWGYVETATPLKTEMALREKLPEEFWIPVN
SLLVSLGQSICRPVSPRCSECPLEKECPQLGITPRKATLKAKKNTPSYRYISWNVNGIRA
VEKKGFIDIVQELNPDVIGLQETKAQPEQLSESLKNIPGYTSYWYSAQRKGYSGVAFYSK
HEPLQVIYGIGAEEFDCEGRVITLEFADHYLATIYFPNSADQLKRLDYKLRFNRALLAFF
QKLEKEKAVILCGDFNVAHKEIDLKNPKSNVKNAGFTPEERAWMDEFLEAGYTDTFRLFN
QDPENYSWWSYRFSARSKNIGWRIDYFCVSENGQKRIVNAEILPEVMGSDHCPVLLDFKQ
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgggcatagacattggacattttttaacagaggtaaaaaaggccacaagagggcaggct
ctgccggtagtggatcttattgccgtacagacagaggatccctttaaggtactggtggca
acaattctctcggcccgcaccaaggacgaaaccacggcggcgtcctccaagagactcttt
gcccgagcgcaaaccgcagaggaactgacagagctgagcgaagaagagctacaaaagctt
atctaccccgtaggtttttataagaacaaggccggttatctgaaaaaactccctgaagcc
ctgaaggaatttaagggtgtcgtacccgagacaatgacagagctactgcgcctgcccgga
gtcgggagaaagacggcaaacctggtcctcagtatcgcctttaaaaagcccgccatctgt
gtcgacacccacgttcaccgaatcatgaacatctggggctatgtggaaactgcgaccccc
ctgaaaacagagatggccctgcgagaaaaactgcccgaggagttctggattccggtgaac
tccctattggtctccctcggccaatctatctgccgaccagtctcaccacgttgcagtgag
tgccctctggaaaaggaatgtccacaactagggataaccccacgtaaagccacccttaag
gcgaaaaaaaacaccccaagctatcgctatatatcctggaacgtcaacggcatccgggcg
gttgagaagaagggttttatcgatattgtccaagaactgaatcccgatgtcattggcctg
caggagaccaaggcccagccagaacagctctcggagagcctaaaaaacatccccggctat
acctcatactggtacagcgcccagcgcaaaggatattcaggggtggccttctacagtaag
catgaacccctgcaggtaatatacggtattggcgcagaagagtttgactgcgagggacga
gttatcaccctggaatttgccgatcactatctggccaccatctacttccccaacagtgcc
gaccaactgaagcgactcgactataagctacgctttaacagggccctgttggccttcttc
cagaaattagagaaggagaaggcggttattctctgtggcgattttaatgttgcccacaaa
gagattgatctgaaaaaccccaagagcaatgtgaagaatgctggctttaccccggaagaa
cgggcctggatggatgagtttttagaggcaggctatacagacacctttcgcctctttaac
caggaccctgaaaactatagctggtggagttatcgatttagtgccagaagcaagaatata
ggctggcgtatcgactatttctgtgtctctgaaaatggccaaaaacgaattgttaatgca
gagatcctccccgaggtcatgggctctgaccactgccccgtcctcctcgattttaagcag
tag
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