Deinococcus proteolyticus: Deipr_0496
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Entry
Deipr_0496 CDS
T01426
Name
(GenBank) 2,3 cyclic-nucleotide 2-phosphodiesterase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
dpt
Deinococcus proteolyticus
Pathway
dpt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Deipr_0496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpt03019
]
Deipr_0496
Messenger RNA biogenesis [BR:
dpt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Deipr_0496
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
RNase_Y_N
KH_1
KhpA-B_KH
KH_2
Motif
Other DBs
NCBI-ProteinID:
ADY25664
UniProt:
F0RKA5
LinkDB
All DBs
Position
507296..509113
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AA seq
605 aa
AA seq
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MTALYVILALLAVAAAFWAGRTLGAQQRERLEQQHEQQALERADTIRREAEADALALREQ
ARSETQAAQAAALAQAQAQADRLLAQARETAEEHRAEVAQNLREQRQQLEDRRSQLTEQH
LQVQALQGTVSAERLQLEQDRERLEAERQALKAEMAQEREHLSADRQEYRAERDAMNREL
ERQSRRAEQLDVRGERLDALEERLEKQGRDLAAQAEELQARAAAADARLQEVAALSREEA
RARILDALDAELEEEKAARIRTAGDLSSKEIARQARSLIAQAIQRSASETSAQLSVSVVP
IPSDAMKGRLIGREGRNIRAFEALTGVDLIIDDTPEAVMLSSFNPVRREVARHVLQSLLE
DGRIHPTRIEEMVGRAQEDMRTFIHTQGEEAAIEAGVVGLKPGLLQLLGRMYFRSSYGQN
VLKHSIQVAHLTGIMAGELGLDAALARRCGLLHDIGKSIDREVEGTHVDIGVSLGTRFGE
GTEVIDAIAHHHDPENGETLYSVLVAAADAISAARPGARREELEAYTRRLEALEEIAVSF
PGVQQAYAIQAGREVRVIVQPDQVSDAGAVLLARDVAGRIEQDMEYPGQVQVTVVRESRA
TEVAR
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgccttatatgtcatcctggctctgttggcagtcgccgccgccttctgggccggg
cggacactgggcgcacagcagcgtgagcgcctagagcaacagcacgaacagcaggccctg
gagcgggccgataccattcgccgcgaggccgaagccgacgccctggcgctgcgtgagcag
gcccgcagcgagacgcaggcggctcaggcagcggccttggcccaggctcaggcgcaggcc
gaccggctgctggctcaggcccgtgaaaccgccgaggaacaccgcgccgaggtggcccag
aacctgcgcgagcagcgccagcagctggaggaccgccgcagccagctgaccgagcagcac
ctgcaggttcaggccctgcagggcaccgtcagcgccgagcgccttcagctggagcaggac
cgcgagcgcctggaagccgagcgccaggccctcaaggccgaaatggcccaggagcgcgag
cacctcagtgccgaccgccaggagtaccgcgccgagcgcgatgccatgaaccgcgagctg
gagcgccaaagccgccgcgccgagcagctggacgtgcgcggcgagcgcctggacgccctg
gaagagcgcctggagaagcagggccgtgacctggccgcccaggcggaggaactgcaggcc
cgcgccgccgctgcagacgcccgcttgcaggaagtggctgccctgagccgcgaagaagcc
cgcgcccgcattctggacgccctggacgccgagctggaagaggaaaaagcggcccgcatc
cgcacggccggcgacctgagcagcaaagaaatcgcccggcaggcccgcagcctgattgcc
caggcgattcagcgcagcgcgtcggaaaccagtgcgcagctctcggtcagcgtggtgccg
attcccagcgacgccatgaagggccgcctgattggccgcgagggccgcaacatccgcgcc
ttcgaagcgctgaccggcgtggacctgattatcgacgacacccccgaagcggtgatgctc
agcagctttaacccggttcgccgcgaggtggcccggcacgtgctgcagtccctgctggaa
gacggccgcattcatcccacccgcatcgaggagatggtcggccgcgctcaggaagacatg
cgcacctttattcatacccagggtgaggaagccgcgattgaggcgggcgtggtgggcctc
aagccggggctgctgcagctgctgggccggatgtatttccgctccagctacggccagaac
gtgctcaagcactctattcaggtggcgcacctgaccggcatcatggcgggcgagctgggg
ctggacgcagccttggcccgccgctgtgggctgctgcacgacatcggcaagagtattgac
cgggaagtcgaaggcacccacgtagatatcggcgtcagtctgggcacgcgcttcggcgag
ggcaccgaggtgatcgacgccatcgcgcaccaccacgacccggaaaacggcgagacgctg
tattcggtgctggtggctgccgccgatgccatcagcgcggcccggcccggcgcccgccgc
gaagaactggaggcctacacccgccgcctggaagccctggaagaaatcgccgtgagcttc
cccggtgtgcagcaggcctacgccattcaggcgggccgcgaggtgcgcgtcattgtgcag
ccggaccaggtgagcgacgccggagccgtgctgctggcccgtgacgtggccgggcgtatc
gagcaggacatggaataccccggtcaggtgcaagtgaccgtggtgcgcgaaagccgcgcg
accgaggtggcccgctag
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