KEGG   Deinococcus proteolyticus: Deipr_0496
Entry
Deipr_0496        CDS       T01426                                 
Name
(GenBank) 2,3 cyclic-nucleotide 2-phosphodiesterase
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
dpt  Deinococcus proteolyticus
Pathway
dpt03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dpt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Deipr_0496
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dpt03019]
    Deipr_0496
Messenger RNA biogenesis [BR:dpt03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Deipr_0496
SSDB
Motif
Pfam: HD RNase_Y_N KH_1 KhpA-B_KH KH_2
Other DBs
NCBI-ProteinID: ADY25664
UniProt: F0RKA5
LinkDB
Position
507296..509113
AA seq 605 aa
MTALYVILALLAVAAAFWAGRTLGAQQRERLEQQHEQQALERADTIRREAEADALALREQ
ARSETQAAQAAALAQAQAQADRLLAQARETAEEHRAEVAQNLREQRQQLEDRRSQLTEQH
LQVQALQGTVSAERLQLEQDRERLEAERQALKAEMAQEREHLSADRQEYRAERDAMNREL
ERQSRRAEQLDVRGERLDALEERLEKQGRDLAAQAEELQARAAAADARLQEVAALSREEA
RARILDALDAELEEEKAARIRTAGDLSSKEIARQARSLIAQAIQRSASETSAQLSVSVVP
IPSDAMKGRLIGREGRNIRAFEALTGVDLIIDDTPEAVMLSSFNPVRREVARHVLQSLLE
DGRIHPTRIEEMVGRAQEDMRTFIHTQGEEAAIEAGVVGLKPGLLQLLGRMYFRSSYGQN
VLKHSIQVAHLTGIMAGELGLDAALARRCGLLHDIGKSIDREVEGTHVDIGVSLGTRFGE
GTEVIDAIAHHHDPENGETLYSVLVAAADAISAARPGARREELEAYTRRLEALEEIAVSF
PGVQQAYAIQAGREVRVIVQPDQVSDAGAVLLARDVAGRIEQDMEYPGQVQVTVVRESRA
TEVAR
NT seq 1818 nt   +upstreamnt  +downstreamnt
ttgaccgccttatatgtcatcctggctctgttggcagtcgccgccgccttctgggccggg
cggacactgggcgcacagcagcgtgagcgcctagagcaacagcacgaacagcaggccctg
gagcgggccgataccattcgccgcgaggccgaagccgacgccctggcgctgcgtgagcag
gcccgcagcgagacgcaggcggctcaggcagcggccttggcccaggctcaggcgcaggcc
gaccggctgctggctcaggcccgtgaaaccgccgaggaacaccgcgccgaggtggcccag
aacctgcgcgagcagcgccagcagctggaggaccgccgcagccagctgaccgagcagcac
ctgcaggttcaggccctgcagggcaccgtcagcgccgagcgccttcagctggagcaggac
cgcgagcgcctggaagccgagcgccaggccctcaaggccgaaatggcccaggagcgcgag
cacctcagtgccgaccgccaggagtaccgcgccgagcgcgatgccatgaaccgcgagctg
gagcgccaaagccgccgcgccgagcagctggacgtgcgcggcgagcgcctggacgccctg
gaagagcgcctggagaagcagggccgtgacctggccgcccaggcggaggaactgcaggcc
cgcgccgccgctgcagacgcccgcttgcaggaagtggctgccctgagccgcgaagaagcc
cgcgcccgcattctggacgccctggacgccgagctggaagaggaaaaagcggcccgcatc
cgcacggccggcgacctgagcagcaaagaaatcgcccggcaggcccgcagcctgattgcc
caggcgattcagcgcagcgcgtcggaaaccagtgcgcagctctcggtcagcgtggtgccg
attcccagcgacgccatgaagggccgcctgattggccgcgagggccgcaacatccgcgcc
ttcgaagcgctgaccggcgtggacctgattatcgacgacacccccgaagcggtgatgctc
agcagctttaacccggttcgccgcgaggtggcccggcacgtgctgcagtccctgctggaa
gacggccgcattcatcccacccgcatcgaggagatggtcggccgcgctcaggaagacatg
cgcacctttattcatacccagggtgaggaagccgcgattgaggcgggcgtggtgggcctc
aagccggggctgctgcagctgctgggccggatgtatttccgctccagctacggccagaac
gtgctcaagcactctattcaggtggcgcacctgaccggcatcatggcgggcgagctgggg
ctggacgcagccttggcccgccgctgtgggctgctgcacgacatcggcaagagtattgac
cgggaagtcgaaggcacccacgtagatatcggcgtcagtctgggcacgcgcttcggcgag
ggcaccgaggtgatcgacgccatcgcgcaccaccacgacccggaaaacggcgagacgctg
tattcggtgctggtggctgccgccgatgccatcagcgcggcccggcccggcgcccgccgc
gaagaactggaggcctacacccgccgcctggaagccctggaagaaatcgccgtgagcttc
cccggtgtgcagcaggcctacgccattcaggcgggccgcgaggtgcgcgtcattgtgcag
ccggaccaggtgagcgacgccggagccgtgctgctggcccgtgacgtggccgggcgtatc
gagcaggacatggaataccccggtcaggtgcaagtgaccgtggtgcgcgaaagccgcgcg
accgaggtggcccgctag

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