Danio rerio (zebrafish): 100037309
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Entry
100037309 CDS
T01004
Symbol
srebf2
Name
(RefSeq) sterol regulatory element-binding protein 2
KO
K09107
sterol regulatory element-binding transcription factor 2
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
100037309 (srebf2)
04131 Membrane trafficking [BR:
dre04131
]
100037309 (srebf2)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
100037309 (srebf2)
Membrane trafficking [BR:
dre04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
100037309 (srebf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
Motif
Other DBs
NCBI-GeneID:
100037309
NCBI-ProteinID:
NP_001082935
ZFIN:
ZDB-GENE-070410-8
Ensembl:
ENSDARG00000063438
UniProt:
A3KNA7
LinkDB
All DBs
Position
3:1107102..1130892
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AA seq
1099 aa
AA seq
DB search
MDASEFMDTMDPSLSELGDEFTLGDIDEMLQFVSNQVDFPDIFEDQMGGGATARTLPQAV
PSAILTPPHTPVQTSSQTHTQTLTQAHTQTHTQTHTQTRTPPVLQPRPQPITQVQTQTFP
MQTLAVQTQAQPQTVMITPTATPSRFIQNQVICQQNNATSFQVLQPQMQSIMTSPQVQPM
TIQHQRVLTPAGQTIQTLSTAPTTVHTMSQQVPVLVHQPQILKTDSLLLTTKPDGTQVLS
TVQSPTGITTLTTPIQTTALQMPTLMSSNILTTVPVVMGGGDKLPIKQLSSGPAHNIGGA
RVGVEQSPVVGPGGVVKEGERRTTHNIIEKRYRSSINDKILELRDLVLGNDAKMHKSGVL
RKAIDYIKYLQQVNHKLRQENLTLKMANQKNKSACVSDVDLELKAEVSLISPPPSDSGSS
SPAQLSPYCIDSEPGSPLLEHEQLKSEPDSPSCVGVMDRSRLLLCALSFLCLSLNPLPSL
LGAEAPAGSPEVAGHGPTRTLFSLPAQTQSFGAWLWCVLPFLLVWVVSGVGVVWGCVRVL
YLWEPVTPLHSPTSVRFWRHRKQADLQLYRGDYAGAVLSLQTCLSVLSRVLPVTTLDIMC
SLSWNLIRYCLRRPAPLGWLVRLVGGRHEGEESQTSSRDAALVYHKLSQLQLTGQMERRP
LWGVCVSLSAVNLCESAEGKLTATQQVQVYVTAAISVRAALGKHLTCLPAYLLSCAEALT
CQSDSKPLPDCLRWIFTPLGRQFFLSCDWSVRSESDGQIFTSARDKADPIAQLHRCFCQK
LLERATHTLIEPQSREDAGEFTGVLEFLQLLNSCTEDSAPSTAPFPALANQSSTSVRDPV
CRWWASVLTAAVHWLQGDDASVRSLLAEAERMPRALHTLDHPLPKAVLALCKAVQMSVCP
QKGEGVVSCLSHCQRASAQLHISVCQSHNNTWLHKGVELLVCDLLLTLRTSLWQRGGGSN
GEPGPAPGSQLSGFQRDLSSLRRLGQAHRQAQHKLFLHETTVRLMAGASPTRTHQLLRHR
THNYTTTDGECVLGERERAHAILLACRHLPLPLLTPPGHRARLLAEAKRTLERVGDRRSL
QDCQHILLRLSGGTTIAAS
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atggacgcctcggagtttatggacaccatggacccgagtctgtccgaactgggcgacgag
ttcaccctcggagacatcgacgagatgctgcagttcgtcagtaatcaggtggatttccct
gatatattcgaggatcagatggggggcggagccacagcgaggaccctcccacaggcggtg
cccagcgcgatcctgaccccaccacacacgcctgtgcagaccagcagccagacacacaca
cagacactcacacaagcacacacgcagacacacacgcagacacacacgcagacacgcaca
ccgccggtgctgcagccacgaccacagccaatcacacaggtgcagactcagacgttcccc
atgcagactctggctgtgcagacgcaggcgcagccgcagaccgtcatgatcacacccacc
gccacaccctcacgattcatccagaaccaggtcatctgccagcagaacaatgctactagc
ttccaggtgctgcagccgcagatgcagagtatcatgacgtctccgcaggtccagccaatg
accatccagcaccagcgcgtgctgacaccggccggacagaccatacagacgctctccaca
gcgcccactactgtacacaccatgtcccagcaagtgcctgtgttggtgcaccagcctcag
atcctgaagacggactctctgcttctgaccaccaaaccagacggcacacaggtgctgtcc
actgtccagagccccacgggcatcaccacgctgaccacgcccatccagaccaccgccctg
cagatgccgacgctgatgagcagcaacatcctgaccaccgttcccgtggtgatgggaggc
ggagacaagctgccaatcaaacagctgtcttcaggccccgcccacaatataggcggagcc
cgagtgggcgtggagcagagcccggtagtgggtccaggaggagtggtgaaggagggcgag
aggagaaccacgcacaacatcatcgagaaacgctaccgctcctccatcaacgacaagatc
ctggagctgcgggacctcgtgctgggcaacgacgccaagatgcacaagtctggtgtcctg
cgcaaagccatcgactacatcaaatacctgcagcaggtgaaccataagctgcggcaggag
aacctgacactgaagatggccaatcagaagaacaagtcagcgtgtgtgtcagatgtggat
ctggagctgaaggctgaggtgtctctgatctctcctcctccgtctgactccggctctagc
tctcccgcgcagctctcaccctactgcatcgactctgagccggggagcccactgctggag
catgagcagctgaagagtgagccggactctccgtcatgtgtgggtgtgatggaccgctct
cgtctgctgctgtgtgctctctccttcctctgcctctccctgaacccgctgccatctctg
ctgggcgctgaggctccggcgggctctcctgaggtggcgggtcacggacccacacgcaca
ctcttctctctgcccgcacagacacagagcttcggggcgtggctgtggtgtgtgctgccc
ttcctgctggtgtgggtggtgagcggagtgggcgtggtctgggggtgtgtccgagtgctg
tacctgtgggagccggtcacgccccttcactcaccgacatctgtccgattctggagacac
aggaaacaagcagacctgcagctctacaggggtgattacgcgggcgctgtgctcagtctg
cagacgtgtctgtcagtgttatccagagttctgcccgtcaccactctggacatcatgtgc
tcgctctcctggaacctgattcgctactgcctgcggagacccgcccccctgggctggctg
gtgcgtctggttggagggaggcacgagggggaggagtcacagaccagctcacgggacgca
gcgctggtgtaccacaaactcagccagctgcagctcacaggtcagatggagcggcgtccg
ctgtggggtgtgtgcgtgtctctgagcgccgtcaatctgtgtgagagtgcggaggggaag
ctgacggccactcagcaggtgcaggtgtacgtgacggcggccatcagtgtgagagcagcg
ctggggaaacacctcacctgcctgcccgcgtatctgctgagctgtgccgaggctctgacc
tgtcaatcggactctaagcccctcccagactgcctgcgctggatcttcaccccattgggt
cgtcagttcttcctgagctgtgattggtcggtgcggtcagagagcgacgggcagatcttc
acctctgcgagagataaagcggaccccatcgctcagctgcaccgctgcttctgccagaaa
ctgctggagagagccacacacacactgattgagccgcagagcagagaggatgctggggag
ttcactggggttctggagtttctgcagctgttgaacagctgtactgaagactccgccccc
tccaccgcccccttccctgcgctggccaatcaaagctcaacgtcagtgcgggacccagtg
tgccgctggtgggcgtcggtgctgacggctgctgttcattggctgcagggtgatgatgcg
tctgtgcgctcactgctggcggaggcggagcgaatgcccagagcactgcacacgctggat
cacccgctgcccaaggctgtgttggcgctgtgtaaggctgttcagatgagtgtgtgtcca
cagaagggtgagggcgtggtcagctgcctcagtcactgtcagcgcgccagtgcacagctg
cacatcagtgtgtgtcagtcgcacaacaacacctggctgcacaagggggtggagcttctg
gtctgtgaccttctcctgactctgagaaccagcctatggcaacgaggaggcgggtctaat
ggtgagcctggtcctgcccctgggtctcagctgtcagggttccagagggacttaagctcc
ctgcgcagactcggacaggcccaccgccaggcccagcacaagctgttcctgcacgagacg
acagtgaggctgatggcaggagccagtcccacacgcacacaccagctgctgcgacaccga
acacacaactacaccaccacagacggcgagtgtgtgttgggcgagcgcgagagggctcat
gcaatcctgctagcgtgtcgtcacctgccgctgcccctgctaacaccaccgggacaccga
gcgcgcctgctagcagaggctaaacgcacgctggagagagtaggagaccgccggagcctg
caggactgccaacacatactgctgagactgagcggagggaccaccatcgctgcgtcataa
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