KEGG   Danio rerio (zebrafish): 100150678
Entry
100150678         CDS       T01004                                 
Symbol
taf4b
Name
(RefSeq) transcription initiation factor TFIID subunit 4
  KO
K03129  transcription initiation factor TFIID subunit 4
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    100150678 (taf4b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dre03021]
    100150678 (taf4b)
   03036 Chromosome and associated proteins [BR:dre03036]
    100150678 (taf4b)
Transcription machinery [BR:dre03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     100150678 (taf4b)
   Coactivators
    SAGA/TFTC/STAGA complex
     100150678 (taf4b)
Chromosome and associated proteins [BR:dre03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TFTC complex
     100150678 (taf4b)
SSDB
Motif
Pfam: TAF4 TAFH
Other DBs
NCBI-GeneID: 100150678
NCBI-ProteinID: XP_017208212
ZFIN: ZDB-GENE-070424-105
Ensembl: ENSDARG00000075732
UniProt: A0A8M6YWV6
LinkDB
Position
20:18260548..18296237
AA seq 833 aa
MSETSVSDKLENDNLRTQTEKKNEAQTNNIENLSETSDKKREVTDLNANVITNRNPDSVS
LNEKADPKTEAGSSNAAPQGPVTVSLLTSSTSASSEAAPKVMVGPAQIKSTTPVVVGARV
VTSSVQGPGTTSLALVPQPGRVSVAISQPRVTTLTTAKGPVMTLPRISTPSQGVPMTRAP
QTVPLQLPANFQVPQGMVLIRSDSGQLMLVSQQALAQAQGMLPKAASANASAIVRPPSSQ
ATVNTTPIIRVSLPPTSASATANIKLNPTVGTAVQKPAAATGTAVFTPSCSAGTTISKPA
AVVCTAVRKPSSTMGPVIKASQMTPNSSTPGTFNQRTNSVTATTVINTSAGKSVGKGGPS
IQSNAPRVVSPNVPPRSSTNTSSTPVTVTAETLENVKKCKNFLVTLMKLASSGTRSANMA
QNVRALVKGLLDGKLEAEEFTEKLYMELKSSPQPYLVPFLKRSLPAVRQLTPNSQLFIQQ
CDHLKPSDSALTKSTNQKASASVSSSLKNSQPTRTPQLVQTTGVVVKQPQVGLAAQSQTQ
SKQMVIQTSTHSTGAVVRQSILQASKTHFSQPTLPAQAHSFKDSTSGSFRDDDDINDVAS
MAGVNLSEENARILASGSELVGSVIRSCQEEPFLFPSALQTRVLHIGGSLGVTEVCPDVL
ELISLATQERLRDLLEKITAVAQHRQISYRDDWRYTQTNDTRSQLKFLEQLERLEKQKRE
EEERETLLRIARSRSNSEDPEQQRLKQRAKEMQQLELAQMEHRDANLAALAALGPRKKKP
LEAPGLGANQLLGSHGHFASRAPVRVTMRDLTFYMEQDPTFRHTLVLYRAFLG
NT seq 2502 nt   +upstreamnt  +downstreamnt
atgtccgaaacgtcggtctcagataagttagagaatgataatcttcgtacgcaaacagag
aaaaagaatgaagcgcaaacaaacaatatcgaaaacctttcggaaacttcagacaagaaa
agagaggtaacggacttaaacgctaatgttatcaccaacagaaacccagattcggtttcc
cttaatgagaaagcagacccaaaaacagaggctggttcatcaaacgctgcacctcagggt
cctgtgacagtctctctactgacctccagcacatcagcctcatctgaagctgctccaaag
gtcatggtaggccccgctcagatcaaatccacaacacccgtggtcgtaggggccagagtt
gtgacgtccagcgttcagggaccagggaccacaagtttggctctggttcctcagcctgga
agagtttcagtggccataagccagcccagagtcaccacactgaccactgccaaagggccg
gtcatgacattgccaaggatttccactccatcacaaggtgtgccaatgacgcgcgcccct
cagacggtgccactgcagctgcccgccaacttccaggtaccacaaggaatggtgttaatc
cgcagtgacagtgggcagttgatgttggtatctcagcaggctctggcccaggctcaggga
atgctgccaaaagcagccagtgccaatgcctcagctatagttagacctccgtcctcacag
gcaactgtaaacaccacaccgatcatcagagtttctctccctcctacaagtgcatcagct
accgccaatattaaactcaaccctactgtggggactgccgtgcagaaaccagccgcagct
acaggaactgctgttttcacaccatcatgttcagcaggaaccaccatcagtaagccggcc
gctgttgtatgcacagccgtcagaaagcccagctctaccatggggccagttatcaaagcc
agtcaaatgactccaaacagcagcacaccagggacatttaaccagaggactaattctgtc
actgcaactacagtaattaatacctccgctggaaagtctgtgggcaaaggtgggccctcc
atccagagtaatgccccgcgagtggtgtctcctaatgtaccacccagatccagcacaaac
acatcctcaacaccggtcactgttacagctgagaccttggagaatgtgaagaagtgtaag
aacttcctggtcactcttatgaagctggcatcaagtggcactcgctctgctaacatggcc
caaaacgtccgcgctcttgtcaaaggcctgctggatgggaaacttgaggctgaagaattc
actgagaaactctacatggagctcaaatcgtctcctcagccatatctagtgcctttcctg
aagaggagtctgccagccgtccgtcagctcacgccaaactcgcagctcttcattcagcag
tgcgaccatctcaagccttcagattcagccttgaccaaatccacaaaccagaaggcctct
gcgtctgtcagctcctccctcaaaaacagccagccaacccgaacacctcagctggtgcaa
actacaggagtggtcgtcaaacagcctcaggtgggcttagctgcccagagccaaacccag
tccaaacagatggtcattcagaccagcactcattcaacaggtgctgttgtgcggcagtcc
atccttcaggcgtctaaaacacacttttcccagccgacccttccagcgcaggcacacagc
ttcaaggacagcacctcgggctctttccgtgatgacgatgacattaatgatgtggcctcc
atggctggagtgaacctgagtgaagaaaatgctcgtattttggcctctggctctgaactc
gtgggatcagtgatccgctcctgtcaagaagagccctttctattcccatcagccctccag
acacgagtgctgcacatcggtggctctttaggtgtcacagaggtctgtcctgatgttctt
gagttaatctctctggcgacacaggagagacttcgagacctgctggagaagatcaccgct
gtggcacaacatcgacagatctcttatagggatgattggcgctacactcaaaccaatgac
acacgctctcagctgaagttcctggagcagctggaaagactggagaagcagaagagggag
gaagaggagcgtgagacactactccgcatcgcccggagtcgctcaaacagcgaagaccca
gagcaacagcgcctaaaacagagagccaaagagatgcagcagttggagttggcacagatg
gagcaccgagatgcaaatttggcagcgctggctgccctcgggccccgtaagaagaaacct
ctggaggctccaggcttaggggccaaccagttgttaggttcacatgggcactttgcttct
cgagctcctgttcgagtcactatgagagatttgaccttctacatggagcaagaccccaca
ttcagacacactctcgtgctctacagagcctttctaggttag

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