Danio rerio (zebrafish): 100270734
Help
Entry
100270734 CDS
T01004
Symbol
sgsm1a
Name
(RefSeq) small G protein signaling modulator 1 isoform X4
KO
K21847
small G protein signaling modulator 1
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
100270734 (sgsm1a)
Membrane trafficking [BR:
dre04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
100270734 (sgsm1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_RBD
RUN
RabGAP-TBC
Motif
Other DBs
NCBI-GeneID:
100270734
NCBI-ProteinID:
XP_003198667
ZFIN:
ZDB-GENE-060526-379
UniProt:
A0A8M1RNE2
LinkDB
All DBs
Position
5:20010270..20098601
Genome browser
AA seq
1327 aa
AA seq
DB search
MANTTAEAETRQRLLRNVKKEVKQIMEEAVTRKFVHEDSSHIVSFCAAVEACVLHGLKRR
AAGFLRSNKIAALFTKVAKNFPPAEELCRKAQELELVFENRRSQSLSYSESTRKMPKVLN
FSPQAVRHVWIHAALIEKVLDKIVLYLVENSSKFYEKEAILMDPVDGPILASLLVGPCAL
EYTKMKTADHFWTDPSADELVQRHRIHSGHCRQDSPTKRPALCIQKRHSSSSMDERPSPS
PSARDYVESLHQNSRATLLFGKNNVLVQPRDDMEAVPGYLSLHQTADYMTLKWTPNQLMN
GSVGDLDYEKSVYWDYAMTIRLEEIVYLHCHQQVDCGGTVVLVSQDGIQRPPLRFPRGGH
LLQFLSCLENGLLPHGQLDPPLWSQRGKGKVFPKLKKRCPQGSSESVSDKEEEEATDYVF
RIVFPNSQSEFVAPELIDQGANMWHPTPRKSSCSSCSQNSFSDGAQPNGCNHERTPLKLL
CDNMKNQIISRAFYGWLAYCRHLSTVRTHLSGLVNHTIVEPDVPSDAYSGLTTEVWQKFL
QDCSTYEEKELLRLVYFGGVEPSLRKEVWPFLLGHYQFGMSETERKEVDEQMRACYEQTM
SEWLGCEAIVKQKEKEQHAVALAKCSSGASMDSTTQRIMHRDSTISNESSQSCSSDRQRD
SRLQSDSSSGTQVFESVEEVEQIESEPKNDVGKQVCKISNGTPQNGTSSPDSGHPSSRNF
SVTSGQSDSLSTEDSGIHEPNLKSQPQLTASKEKAACCGEEGKETEERETKMVMKQGVRE
DNKTEVNKVLLDEVVTQESKKATEDSEVKMDISKTARDAFVASTADHSQVTKMEVGESLE
RSLTSENDALTRHTEPDIPKATEVMESTPPERKMNETRVRADIERPHKGIKDITAIREQP
LIAKDLKVSDALEQKVVADIQVSVSEDTEKEATKTNETSKDNDSKTWMDEENNVRVLKPI
DEKTSDLADEAGPTGKRKADMQRKAPVVEETVPLVHEAFSNRKMSEAQDETESDESPSAI
EMEEIPTAKVWERKSSPKRRTTEQATIPALELRLEEAHGKLSSEEVNPEKPEMESLCPQL
DSLAVNTEKIEASSPVSSIGTTYSQELLDMYTLNLHRIDKDVQRCDRNYWYFTPANLEKL
RNIMCSYVWQHLEIGYVQGMCDLLAPLLVILDDEAMAFSCFTELMKRMNQNFPHGGAMDT
HFANMRSLIQILDAELFELMHQNGDYTHFYFCYRWFLLDFKRELVYDDVFAVWETIWAAK
CVSSSHFVLFIALSLVEIYRDIILENNMDFTDIIKFFNEMAEHHNIKQILTLSRDLVCKV
QTLIENK
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacacaacagcagaagccgaaacccgtcagagactcctgcgaaacgtgaagaag
gaggtcaagcagatcatggaggaagcagtcacaaggaagtttgttcatgaagacagcagc
catatcgtctcgttctgcgctgccgtcgaagcctgtgtgcttcatggattgaagaggaga
gctgctggtttcttaagaagcaacaaaatagcggcgctgttcaccaaagtggccaaaaac
ttccctccggctgaagagctgtgcagaaaagcccaggaactggagctggtctttgagaac
aggcgaagtcagtccctctcatacagcgagagcacccggaagatgcccaaagtcctgaac
ttctctcctcaggccgtcagacacgtgtggatccacgccgcactcattgagaaagtgctg
gacaagattgtactgtacctggtggaaaacagcagtaagttttatgaaaaagaggctatc
ctaatggacccagttgatggcccaatcctcgcttctttgctagtgggcccctgtgcgtta
gagtacactaaaatgaagacggcagatcatttctggacagatccttcagctgacgagttg
gtgcaaaggcatcgtattcatagtggccactgccgacaagactcgcctacaaagagacca
gccctctgcattcagaaaaggcactccagtagcagtatggatgaaaggccatctccctcc
ccctcagccagagactacgtggagtctcttcatcagaattccagagcgaccctcctgttc
ggcaagaacaatgttctggtgcagccgagggatgatatggaagcagtcccaggatacctc
tctctgcaccagacggctgactacatgactctgaaatggacaccaaatcagctaatgaac
ggctcagtgggagatcttgactatgagaagagtgtttactgggactatgccatgaccatc
cgcctggaggagattgtgtatttgcactgtcatcagcaggtggactgtgggggaacagtg
gttctggttagtcaggatgggattcagagacctccgctgcgttttcctcgtggtggtcat
cttcttcagttcctctcctgtctggaaaatggtctgctgcctcacggccaattagaccca
ccactgtggtcccaaagaggaaagggtaaagtatttcctaagctaaaaaagagatgtcct
caaggatcgtcagagtcagtctcggacaaagaagaggaagaagcgacagattatgtcttc
cgcattgttttcccaaacagccagtcagaatttgtggcacctgaattgatagatcaggga
gcaaacatgtggcacccgacaccaaggaaatcatcgtgctcttcctgctcgcagaatagt
ttctctgatggagcacagcccaatggatgcaaccatgaaaggacccctctgaagttgctg
tgtgacaatatgaagaaccaaatcatctcccgggctttctacggatggctggcgtactgt
cgtcacctgtccacggttcgcactcacctgtctgggctggtcaatcacactattgtggag
ccagatgtgcccagtgatgcctatagtggcctcacaactgaagtgtggcagaagtttctt
caagactgcagtacctatgaagaaaaggagttgctgcggctagtttatttcggtggagtt
gagccttctttacggaaagaggtttggcccttcctgttgggtcattaccagtttggaatg
tcggagactgagagaaaagaggtggatgagcagatgcgagcgtgctatgaacagactatg
agtgaatggctgggttgcgaagccattgttaagcagaaagagaaagaacagcacgccgtg
gcattagccaaatgttcatctggggcaagtatggacagcaccacacagagaataatgcac
cgcgactccactatcagtaatgagtcctcgcaaagctgtagttctgacaggcaaagagat
tccaggcttcaaagcgactccagtagtggcacacaggtgtttgagtctgttgaagaggtc
gagcaaatcgagtctgagcccaagaacgatgttggcaaacaggtttgcaaaatctcaaac
ggaacccctcaaaatggcaccagctctccagactccggccacccctcttccagaaacttc
tccgtcacctctggtcagtcggactccttgagtacagaggacagcggaatacatgagcca
aaccttaaaagtcaaccgcaactaacagcatcaaaggaaaaggctgcatgctgcggagag
gaaggtaaggagactgaggaacgtgagaccaaaatggtgatgaaacagggggtaagagaa
gataataaaactgaggttaacaaagtgttattagatgaagtggttacacaggaaagcaaa
aaggccactgaggactctgaagtcaagatggatatttcaaaaacagcccgagatgccttt
gtggcttctacagcagatcacagccaggtgaccaaaatggaagtgggcgaatctctggag
aggagtttgacatcggaaaatgatgcactgacacggcatactgagccagatattcccaaa
gcaacagaggtcatggaatcgactcctccagagcggaagatgaatgagactcgagtaaga
gcggacatcgaaaggccccacaagggaattaaagatattacagcaatccgagagcaacct
ttgatagcaaaagatcttaaggtatcagatgcactcgagcagaaggttgtagctgacatt
caagtgtctgtttcagaggatacagagaaagaagcaacaaaaaccaatgaaacaagcaaa
gataatgactctaagacatggatggatgaggagaacaatgttagagtgttgaaaccaatt
gatgagaagaccagtgatttagccgatgaagctggtccgacaggaaaaagaaaagcagat
atgcaaaggaaagctcctgtggttgaggagacagtcccattggtgcatgaagcttttagc
aatagaaagatgagtgaagcccaagatgaaaccgaatcagacgagtctccctctgccatc
gagatggaagagattcctacggctaaagtgtgggaaaggaaaagttcgcccaaaagaaga
acaactgagcaagcaactattcctgcattggagctccgactagaggaagctcatggaaag
ctcagctctgaagaagtgaaccctgagaagccagagatggaaagtctctgcccacaacta
gattcactggctgtaaacacagagaagattgaagcttcctctccggtttcctctataggg
accacttattcacaagagcttttggacatgtacactctaaatctgcatcgcatagataaa
gatgttcagcgctgtgaccggaattattggtacttcacacctgctaacttggagaaactg
cgcaacatcatgtgcagttatgtttggcagcaccttgaaattggatatgtccagggcatg
tgtgacctcctcgctcccctgctagttattctagatgacgaggccatggctttcagttgt
ttcactgaactaatgaaaaggatgaatcagaattttcctcatggaggagcgatggacact
catttcgccaacatgagatctctgatccagattctagacgcagagttgtttgagctgatg
catcagaatggagactacactcacttctacttctgctatcgctggtttcttcttgacttt
aaaagagagttggtgtatgatgatgtgttcgctgtttgggagaccatctgggctgctaag
tgcgtttcctccagccatttcgtgctctttattgctctttcgttggtggagatctacaga
gacatcatcctggagaacaatatggacttcaccgacatcatcaagttttttaatgaaatg
gctgagcatcacaatatcaagcagatcctgactctgtctcgagacctggtgtgcaaagtg
cagacacttatagagaacaagtag
DBGET
integrated database retrieval system
