Danio rerio (zebrafish): 100538179
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Entry
100538179 CDS
T01004
Name
(RefSeq) DNA-binding protein RFX7-like isoform X1
KO
K09175
DNA-binding protein RFX7
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
100538179
Transcription factors [BR:
dre03000
]
Eukaryotic type
Other basic domains
RF-X
100538179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX5_N
RFX_DNA_binding
Pox_D5
Cdc6_C
Motif
Other DBs
NCBI-GeneID:
100538179
NCBI-ProteinID:
XP_003201650
Ensembl:
ENSDARG00000103691
UniProt:
A0A0G2KLK6
LinkDB
All DBs
Position
25:375891..405745
Genome browser
AA seq
1551 aa
AA seq
DB search
MADDQQQPPGAPGASLQSPEATALQYNKIKNSICKSVQSKVESILQDVEKFTDIEKLYLY
LKLPSGPSGGNDKRTENQRGSASPALCDQNSMSSSRTQQMYAFNWIRNHLEEHPETSLPK
QEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGMRGKSKYCYSGLRKKAFVH
MPSLPNLDLHKSGDGCELLESAGQSPSAEDEMRSAACGLVCEWAQKVLSRQFDSVEELAR
FLLNSHYIGTKSMAALTVMTGTPTGMKTPTPASAFVPTAEANSFQPQVKTLPSPSVDAKQ
QLQRKIQKKQQEQKLTSPLPMDAQARRAEAGTPVPGSSLTSSSPALLSPQPTIGIVVAAV
PSPITVQRNRQLMTSPSPVGAAEGKVVPVNFQVVTQPVKQSPKTPQNIPASPVGDRLARH
RYAQILPKPSATSAIALRSPPTLLITNSPIKTVMPTSHVSSVNVVKMTAISLAPNSSSTT
TPLRPASTGISSTASLEESNQAQNGASVMSSGLGKAGRLSSNPTISAPTATSEVKVTFEA
VNDSATAADKQSTASGASTGLKNERATKFRASSEPSLLIKASPVPERVTRAKSDSTAPSS
TIMGALAPSSNNNNNDQQESTLYLTVTSQNVDAELSSICAVATASTSKDAVLGSKSPRKR
SASVLETHTIPVKRVFISQQPLDVSSNAKPGLVIAAKRIQRPGTPARPESAPCKVTLKHS
SSLPTQILALSDTPIGVLDTSQTVNAQSTTQMENDVADISSDEMASGNSTVLLQQIPSHQ
QISSAVSQEVSAVSELKSSLQDYSQQIQAEHKQIAANPLPMMTQASETSSQLTLQQDIVD
FAGSQASIDYFPFNDDDMTQDSIVEELVQMEEQMKLNSSLQSYLNCVDISIQGQATVGQG
AILSPHQTNTQFYHSSHSSTTPVHTPTPTPTPTPTPTPTPTSEILPGGHSLTRESPCSRM
ATVTPVDSILGGRHTPISTPLSNCSSSVPPSPIECRNPFAFTPINSSITGYHDGSVVSSS
PVKPMQRPMATHPDKAKLEWINNRYNSTAGSPVISTNSTIGILPSYQDLVEDHFRKPHAF
AIPGQTLQSQSRHQDGNLGRLATVSPVQQGQQTTLSSKQESFAVPAPLDNKGAGSTTASG
GGTFRCRSVSPAVRQRNLSGTTAQTVTTAPRSVVSPFNCPLTSEVLNILSNSQSVVSASS
LAQRSQSVPLNIMMQSELLPVSHQAQQSNSAKITTVLLSKMDTDGDDAVRGLGVNNLPAN
YTARMNLTQILETTQGFPVGPNSQNQQLPLDSSPSPFDFQKTGYLMSTGEEQVAYSSGET
QAQSGPGLQPTEEQLELQEPQLELQDQQLQLQNQQLQLPDQQLQLQEQQLQLQSQQLQLP
DQQLQLQEQELHLQDQQLQLQDQQLQLSDQQQLQNDPQQHLLSQTSQQVVDQEQQEQLDF
NTTVKDLLGEDSLNPSSQLVGQVASELSAVASDFSSDIRLTSDLTSSINDLNTLDPNLLF
DPSQQQDQYEDATLEELKNDPLFQQICSDTVNSAGFDWLENKDQPTVEMLG
NT seq
4656 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgatcaacaacaaccgcccggtgctcccggtgcgtccctgcagagccccgag
gccacggcgctgcagtacaacaagatcaagaattccatctgcaaatctgtacaatcaaaa
gtggagagtatattgcaagatgtggagaagtttacagatatcgaaaagctctacctctac
cttaagttgccttctggtcccagtggtggcaatgacaaaagaactgagaatcagaggggc
tctgcaagtcctgcattatgtgaccagaattccatgtcgtccagtcggactcaacaaatg
tacgcgtttaactggatccgaaatcatctggaagagcacccggaaacctcactgccaaaa
caagaggtgtacgatgaatacaagagttattgcgacaatctgggttaccatcctttaagc
gcagctgattttggaaagatcatgaaaaacgtttttccgaatatgaaggcacggcgtttg
ggcatgagggggaaatcaaaatactgctacagtgggctgaggaaaaaagcatttgtgcac
atgccgtcgctccctaacctggacttacacaaatcaggggatgggtgtgaattgttggag
tcggcaggacagtctcctagtgcggaggatgagatgcgctctgcagcctgcggtctggtt
tgcgaatgggctcagaaggttttgagccgccagtttgacagtgtggaggaactggcacgc
tttcttctcaacagtcattatataggcactaagtccatggcagctcttactgttatgact
ggaaccccaacaggtatgaaaaccccaacgccagcttctgcttttgtgccaactgctgaa
gccaactcattccagccccaagtgaagacccttccttcaccttctgtcgacgccaaacag
cagctgcagcggaagatccagaagaaacagcaggagcagaaactcacttctccattgccc
atggatgcccaggccagaagggcagaggcgggtacacctgtacctggatccagcttgact
tcttcaagtcctgcactgctgtcccctcaaccaaccataggaattgttgtcgctgctgtt
ccgagtcctatcacggttcagagaaaccgtcaactgatgacctccccaagtcctgttgga
gcagcggaaggaaaagttgttcccgttaacttccaggtcgtgacacaacctgttaagcag
tccccgaaaacaccccagaatatccctgccagcccagttggtgaccggttggccagacac
cgatatgcccagattttacctaaaccttctgccacaagcgccattgcactccgttcgccc
ccaacactcctcatcaccaacagcccaattaagacagtgatgcccacgtcccatgtaagt
tctgtaaatgtggtcaagatgactgcaatatcacttgcacctaatagcagtagtactact
accccgttacgacctgcctcaaccggaatcagtagtacagcctccctggaagaatctaac
caagctcagaatggggcgtctgtcatgtcatctggacttgggaaagctgggcgtctttct
tcaaacccaaccatatcagcacccaccgctaccagtgaggtgaaagtaacatttgaagct
gtgaatgactcggctaccgctgctgataaacaaagcactgcatcaggggcaagtacagga
ctaaagaacgaaagagccactaaattcagggcttccagtgaaccttctcttcttattaag
gcgtcccctgtgcctgagagagtgacaagggccaagagtgactctacagccccttcaagt
acaatcatgggggctcttgccccaagcagcaataataacaacaacgatcaacaggaaagt
actttgtatttaactgttactagccagaatgtagacgccgaattgtcatccatttgtgcg
gtggcaactgcaagcacttctaaagatgctgtgcttggttcaaaaagccctcgaaaacgc
tctgcatctgttttggaaacccatacaatcccagttaaaagagtattcatttcccagcag
ccattggatgttagcagtaatgccaagcctggtcttgtaatagcagctaaaaggatccag
agacctggcaccccggcaagaccagagagcgctccatgcaaagtcacacttaaacatagt
agctctcttccgactcaaatcttggctctctctgacactcccattggagttctggacacc
tctcagactgttaatgctcagagcactacgcagatggagaatgacgttgctgatattagc
tcggacgaaatggcttctggtaatagcacagttttactccagcaaatcccaagccaccaa
caaataagcagtgccgtttctcaggaggtatctgcggtaagcgagctgaagagctcactg
caggactactcgcaacagattcaagcagaacacaagcagattgcagctaacccattgcca
atgatgacccaagcatctgagacctccagtcagctcacccttcagcaggacattgttgat
tttgcaggatcccaagctagcattgactatttccccttcaatgatgatgatatgacccag
gatagtattgttgaagagcttgtacagatggaggaacagatgaagttgaatagcagcttg
cagtcctacctaaattgtgtggatatatccatacaaggtcaagccacagttggccaagga
gcgattctgtcaccccatcagacaaatacacagttctatcattcctctcacagtagcacc
acgccagtccacacaccaactccgacacctacaccaacacctactcctactccaactcct
acctccgaaattctaccagggggtcatagcttgaccagagaaagcccttgttcccgaatg
gcaactgttacaccagtggacagcatcttaggtgggcgccatacacctatcagcactcca
ctgtcaaactgcagcagcagcgttcctccaagccccattgaatgtcgcaatccatttgca
tttacccctatcaactccagtataactggctatcatgatggtagcgttgtatccagcagt
ccagtgaaacccatgcagaggccaatggccacccacccagataaagccaagctggagtgg
attaacaacaggtacaacagcactgcagggtctcctgttatctccaccaactccactatt
ggcattctgcccagttaccaagacctggtcgaggaccactttcgcaaaccacacgccttt
gccattccaggccaaaccctccagtctcagtcaaggcatcaggatggaaacttgggaagg
ctagcaactgtttctcccgtgcaacaaggacagcaaaccacccttagtagcaagcaggaa
agttttgcagtcccagctccattagacaataaaggggcaggaagcacaactgcatctgga
ggtggaacattccggtgtcgcagcgttagcccggcagttcgccagcgcaaccttagtggc
accactgcacaaacagtcaccaccgccccacggtctgttgtttctccctttaactgcccc
ctgacatctgaggtcctgaatattctgtccaacagccagtctgtggtcagtgccagcagc
ttggcccagaggagtcaatcggtgccactaaacatcatgatgcagtctgaactgctgccc
gtcagtcaccaggcacagcaaagcaatagtgccaagatcaccaccgtgctcctcagcaaa
atggacaccgatggagacgatgcagtacgagggcttggtgtaaataacctgccggccaac
tacacagcgcggatgaacttaacccagatcttggaaacaacacaaggctttcctgtaggc
ccaaattctcaaaaccagcagctccctctggactcgagcccttcgccttttgacttccag
aagacaggttacctcatgagcacgggggaagagcaagtcgcctactccagtggtgagacc
caagcacaatcaggcccaggactgcaaccaacagaagagcagcttgagctccaagaacca
cagctagagctgcaagatcaacagctgcaactccagaatcaacaactgcagcttccagat
cagcagttgcaactgcaggagcaacagctgcaactccagagtcaacaactgcagcttcca
gatcagcaattacaactgcaggagcaagagctgcatcttcaagaccaacaattgcaacta
caggaccagcagttgcagttgtcggaccaacaacagttacaaaatgatccccagcagcac
ttgttgtcccagacctcacaacaggttgtggatcaggagcagcaggagcaactggacttc
aacactactgtcaaggatcttctgggggaggacagcctcaatcccagctcgcaactggtc
ggacaggtggcttcagaactcagtgctgtcgcctctgacttttctagcgatatccgctta
acttcagaccttactagtagcattaacgacctgaacactttggaccccaacttgctgttt
gaccccagtcaacagcaggaccaatatgaagacgccacactggaagaacttaagaacgat
cctctgtttcagcagatttgcagcgatactgtgaactctgctggttttgattggctggag
aataaagaccagccaacagtggaaatgttgggataa
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integrated database retrieval system
