Danio rerio (zebrafish): 393973
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Entry
393973 CDS
T01004
Symbol
rae1
Name
(RefSeq) mRNA export factor
KO
K14298
mRNA export factor
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
393973 (rae1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dre03019
]
393973 (rae1)
03036 Chromosome and associated proteins [BR:
dre03036
]
393973 (rae1)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
393973 (rae1)
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
393973 (rae1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
eIF2A
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
393973
NCBI-ProteinID:
NP_957292
ZFIN:
ZDB-GENE-040426-1029
Ensembl:
ENSDARG00000007196
UniProt:
Q7ZWF0
LinkDB
All DBs
Position
6:22326590..22334062
Genome browser
AA seq
368 aa
AA seq
DB search
MSLFGTNTGFGSGGTGVFGSTTTDSHNPMKDVEVTSPPDESISCLAFSPPTMPGNFLIGG
SWANDVRCWEVQDNGQTVPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQA
IQIAQHEGPIRTIHWIKAPNYSCIMTGSWDKTLKFWDTRSPNPMMSLQMPERCYCADVVY
PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQSKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTATPQDIYAVNAISFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPITACCFNHNGNIFAYASSYDWSKGHEYYNPQKKNYIFLRNAAE
ELKPRNKK
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtttgggacaaacacgggctttgggtctggagggaccggtgtatttggcagt
accaccacagacagccataatccaatgaaggatgttgaagtaacttcgccacccgatgag
agcataagctgcttggcatttagtcctcctacgatgcctgggaactttctcatcggaggt
tcgtgggccaatgacgtacggtgttgggaagtgcaagataatggtcagactgtccctaaa
gcccaacagatgcacactggcccagtactggatgtgtgctggagtgatgatggtagtaaa
gtctttacagcttcttgtgataaaactgccaagatgtgggatctgaacagcaatcaggcc
attcagatagctcaacatgaaggtccaatcaggacaattcactggattaaagcaccaaac
tacagctgtattatgactggcagttgggacaaaactttgaagttttgggatacacgttcc
ccaaacccaatgatgtccctccagatgccagagaggtgttattgtgccgatgtggtatat
cccatggctgttgtagccactgcagaacgtggtcttattgtttatcagttagaaaatcag
ccttcagagtttcgacgtatagagtcacctcttaagcatcagcaccgctgtgtggctatc
tttaaggacaaacagagtaagcctactggatttgccctgggcagcattgagggacgagtt
gccattcattacataaatccacctaacccagccaaggacaatttcacctttaagtgccac
aggtccaatggaaccaatactgccacaccccaagatatctatgctgtgaatgctatctcc
tttcaccctgtccatggcacactggcgacagtaggctctgatgggcgcttcagtttctgg
gataaagatgcccgtactaagctgaagacttctgaacaattagatcaaccaataacagct
tgttgcttcaatcacaatgggaatatatttgcctatgcatcaagttatgactggtccaag
ggacatgaatattacaatccccagaaaaagaattacatcttcttgcggaatgcagctgag
gaactgaaaccacggaacaagaaatga
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