Danio rerio (zebrafish): 407723
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Entry
407723 CDS
T01004
Symbol
smcr8b
Name
(RefSeq) guanine nucleotide exchange protein smcr8b
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
407723 (smcr8b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
407723 (smcr8b)
Membrane trafficking [BR:
dre04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
407723 (smcr8b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Folliculin
PCYCGC
UPF0181
Motif
Other DBs
NCBI-GeneID:
407723
NCBI-ProteinID:
NP_999967
ZFIN:
ZDB-GENE-061122-1
Ensembl:
ENSDARG00000015803
UniProt:
Q6PUR7
B3DGB6
LinkDB
All DBs
Position
1:8534698..8540045
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AA seq
985 aa
AA seq
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MIGSPDLVAFTKETDFSEITTDSSVLPEDLSVPMYPYTGDATPWSKISSAKLKKDFILIS
EFSEQVGPQPLLTVPLETKACGTFDLNYFSLRIMSVDYQTSLAGSPGYGSFKLNFVEDSK
VVLADSREGVFAYVHHLTLYDLEARGFVRPLCLAYVSSDENKIIQQFQRISTEFNKVSEC
LKTGNRKNFANELEVKLRDLEYTRVVLQKELNTVSVKCSSEREPILNGVHSFERNADEVK
LNEKSSHTDEISPQEKDGCGNSRKVEVKLENENRSHFEHEQYGKQRKDKPDKTSCPMPLA
NKNDELASVEKLIQDYKSLLKQVTCYPTRKLRDSEYSPYEPDDLPQSFDLDLDSQFAGPM
LECSVFTYTNTPSQTLQQINSTSSSRFDKRLKTLEELCDDYFYQQALQQLYSIERTFRGD
ACYLYTQQLCRNLLRNLKSTNFLFEDPCDLDDDVGLQIGQSTIQQPSFLPAPSFLSGPVS
LESYASCVEMVPIKLELGGSSQSQVQHSTLNTPSKDNRPQVADKSPAEVEMKGEIISAPD
CQGNVESVSNLMKTSISSGDSIEVLGTERSFRSQGANTLVETAMHRPPPLSSATALEGLK
QGRVPTRRTCSEDSIEVLCITESISPDELRASYPCAIDEESPEQETDEKNSSQYQEDNNE
KSIYVQGKISADHENACLKKLHPSVTVTPPDCPLTLEETSFQDSCQATESATMLLLDEPS
RMVPDDLSDCFSYRSTTASTTSECTFPACLPKDKREGGTRRRRGRVGRAALQFMRQFPFA
VHAVFSLLSGRTLVVLGSEEAAVRRLVTALSVYLPHLTKYKDSIQPWTSTPLQLTDLLNW
KLIGFDRMCSFNPSSLPHCLDHYSRYLSILDVDQKTLHCPTYSGSLINLLVEPKSHFKRG
NTYFTFAQSVQSKLVTKAFLLTFSHGHPSPSRPQGSSGTECFLSELHTDDKKILRYLSEL
IKLHFMEVTPNVLLFSYTTTSIFKL
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgattgggtctccggacttggtagctttcaccaaagaaacagatttcagtgaaataacc
acagactcttcggtacttccagaggatctgtctgtgcccatgtatccatacactggggat
gccaccccatggtccaagatatctagtgccaagttaaagaaagatttcatcctcatatca
gagttttcagagcaagttggcccccagccattacttacagttcctcttgaaactaaagct
tgtgggacttttgatttgaactacttctctcttcggatcatgtcagtggactatcagact
tccctggccggctctccaggttacggttccttcaagctgaactttgtagaagactcaaag
gtggttttagcagactcaagagaaggagtatttgcatatgtgcaccacctgaccctctat
gacctggaggctcgaggttttgtgcggcctctttgtcttgcctatgtgtcgtctgatgaa
aataaaatcattcaacaattccagaggatttccacagaattcaacaaagtctcagaatgt
ctgaaaactggaaacaggaagaactttgcgaatgaactggaggtaaagcttagagatttg
gagtatacaagagtcgtgttacagaaagagttaaatactgtgtctgtaaagtgcagcagt
gaaagggaaccaatattaaatggtgtacattcatttgagaggaatgcagatgaggtgaaa
ctgaacgagaaatcctctcacacagatgaaatatcaccgcaagaaaaagacggatgtggg
aattctagaaaggtggaagtgaagcttgaaaatgagaataggtcacattttgaacatgaa
caatacgggaaacaaagaaaggacaaaccggataaaacatcatgtccaatgcctttggct
aacaaaaatgatgagctggccagtgtagaaaaactgatccaagactataaaagccttcta
aagcaggtcacttgttacccaaccagaaagcttagagactctgaatactccccttatgaa
cctgatgacctccctcagtcttttgacctcgacctggacagtcagtttgccgggccaatg
ctagaatgcagtgtttttacttatacaaacacaccctcacaaactctgcagcagattaac
tccacgtcatccagccgatttgacaagcgtctgaaaactctcgaggagttgtgtgatgac
tacttctaccaacaagcactgcagcaactgtactctatcgagagaacgttcagaggtgac
gcctgctatctctacactcaacaactctgccgaaatctcctccgcaacctcaaatctact
aatttcttgtttgaggatccgtgcgacctggacgatgatgtagggttacagattgggcaa
agcacaatccagcaaccgtcctttctccctgcaccctcatttctaagtggaccggtcagt
ctcgagtcgtacgcatcttgtgttgaaatggtgccaataaaacttgagttgggtggatcc
agccaatctcaagttcaacatagcactttaaatacaccttcaaaggacaaccgaccccaa
gtagcagacaaatccccagcagaggttgagatgaaaggtgagatcatttcagctccagat
tgtcaaggaaatgtggaaagtgtctcgaatttgatgaaaaccagtattagtagtggagac
agtattgaggtgttgggaacagagaggtcatttagatcccagggggcaaatacgctagtg
gaaacagcaatgcacagacctccacctttgtctagtgccactgcactggaaggtctaaag
caaggaagggtgcctaccagacgaacatgcagtgaagacagcattgaggtgctttgcata
acagaatccatctcacctgatgaactgcgtgcctcatacccctgcgcaattgatgaagaa
agcccagagcaagagactgatgagaaaaactcgtctcaatatcaagaagacaacaatgaa
aagagtatatatgttcagggaaagatctctgcagatcatgaaaatgcatgtttgaaaaag
ctacatccatcagtcactgtaaccccaccagactgccctttgactctagaagaaactagc
tttcaagactcttgccaagcaacagaatcagccactatgttgttgttggatgagcccagc
cggatggtacctgacgatttatcagactgcttcagctatcggagcaccactgcatccacg
acctccgaatgcactttccctgcgtgtcttcccaaggacaaaagagaaggtgggaccaga
cggagacgaggcagagtaggaagagcagcacttcagttcatgcggcagtttccctttgca
gtgcatgcagtgtttagccttctaagtggacgaacattggtggtactaggaagtgaggag
gctgctgtgagacgactagttacagcactgtccgtgtacctgccacatctgactaaatac
aaagacagcatccagccttggacttcaacaccactgcagcttacggacctgctcaactgg
aaactcattggttttgacaggatgtgcagttttaatccctcaagtctgcctcactgcctg
gaccattacagccggtacctcagtatcctagatgtagatcaaaaaaccctgcactgcccg
acctacagtggttctctcatcaacctgctggtggaacccaagagccactttaaacgtgga
aacacctacttcacattcgctcaaagtgtgcaaagcaagctcgtcaccaaagcattcctc
ttaacattctcacatggtcacccttcacccagcaggccccagggaagctcagggacagaa
tgctttctttctgaacttcacactgatgacaagaaaatccttcgctatttatctgaactc
atcaaactgcacttcatggaggttactcccaatgtgctcctattcagctacaccacaaca
tccatcttcaaactgtga
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