Danio rerio (zebrafish): 492769
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Entry
492769 CDS
T01004
Symbol
ythdc1
Name
(RefSeq) YTH domain-containing protein 1
KO
K20100
YTH domain-containing protein 1
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dre03041
]
492769 (ythdc1)
Spliceosome [BR:
dre03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
492769 (ythdc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
492769
NCBI-ProteinID:
NP_001007411
ZFIN:
ZDB-GENE-041114-114
Ensembl:
ENSDARG00000051953
UniProt:
Q5U3V6
LinkDB
All DBs
Position
5:69878654..69903372
Genome browser
AA seq
679 aa
AA seq
DB search
MSVDRRDEKDGELNVLEDILTDAPDQDDELYNPESEHDVNEKKGSKRKHDRGDAQDAKRL
RASGHNTRQPMKRAAPSSGSNGKKTSNPRGRHAPEDLYDDRKNHSGRGGASRADLSKGYG
EKGLSSSRDSQRRIKPLMPELTEKMRRTSEESAGRASRSSREEEAHSEEYATGSSVASSE
GNCSDVEEEGAMPEEGEEKEGEEEEEEEEEGDDDDDEEEEYVLEEEDAREGNEQNDYDTR
SEASDSRSESVSFSDGESVHSASGSDASGSEKKHEKLSSSVRDVRKDRINKLKHILREAR
FFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRAARSVVLIFSVRESGKFQGFARLS
SESHHGGSPIHWVLPAGMNAKMLGGVFKIDWICRRELPFTKTAHLANPWNEHKPVKIGRD
GQEIEPECGTELCMLFPHDESIDLYQVIHKMRHKRRMHSEPRSRGRLPHREPVPRDMGRR
RPEEYDMHNRKRPRIDYTPEFPQRPGFMQDPRNPPVDRRFSGVRRDVFLNGSYNDYMREF
HHNIGPPPPWQGMAPYPGMEHPPQHPYYQHHPPPPQAHPPYSGHHPMPHDARFREKRVVR
SFASSLHDYDMRVDDFLRRTQAVVSGRRSRPRERDRQRERDRPRDGRRDRERERGRERDR
ERERIRDREREKERGRYRR
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcgacaggagagacgagaaagacggggaactcaatgtgctggaagacattttg
actgatgctcctgaccaggacgacgagctctacaatcctgaaagtgaacatgatgttaac
gagaaaaaagggtctaaaaggaagcacgatcgaggggatgctcaggatgcgaagcgcctg
cgagcttcaggacacaacaccagacaaccaatgaaaagagctgctccttcttctgggtca
aacggtaaaaagaccagcaatcccagaggaagacacgcaccagaagatctatatgatgac
agaaagaaccattctggaagaggaggtgcgtctcgggctgatctgtcgaaaggatatggt
gaaaaaggcctgtccagcagcagagactcacagagacggatcaaaccattgatgcctgag
ctgacagagaagatgcggagaaccagtgaggagagtgcaggcagagcaagtcgatcctcc
agggaagaggaggctcattcagaagaatatgccaccggcagctccgtggcttcgtcagaa
ggaaactgctcagacgttgaagaggaaggagccatgccggaggaaggagaagagaaggaa
ggagaggaggaagaggaggaagaagaagagggagatgacgacgatgatgaagaggaagag
tatgtgctggaggaggaggacgctcgtgagggaaatgaacagaatgactatgacactcgc
agtgaggccagtgactcccgctctgagtcggtgtcgttctcagatggagagtctgtgcat
tcagcatcaggctcagacgcatcaggttctgaaaagaaacatgaaaaactgtcctcgtct
gtcagagatgtgaggaaggatcggatcaacaagctgaagcacatcttgagagaggccagg
ttttttctcattaagagcaacaatcatgagaacgtttccctggctaaagcgaagggcgtg
tggtccactctgcctgtcaacgagaaaaaactcaatgctgcttttcgcgctgctcgaagt
gttgtgctcattttttcagtcagggagagtggaaaatttcaaggttttgcacggctgtcc
tcagagtctcatcatggaggatctcccatacactgggttttgcctgcaggcatgaatgcc
aagatgcttggaggggtctttaaaattgactggatatgcaggcgtgaattacctttcacc
aaaacggctcatcttgctaacccatggaatgagcacaagcctgtgaagatcggacgtgac
ggacaggagattgaaccagagtgcgggacggagctctgcatgctcttcccccacgacgag
agcattgatttgtatcaggtcattcacaaaatgcgccacaagaggaggatgcactcagag
cctcgatctcggggccgactgccccacagagagcccgtccctcgggacatgggaaggcgt
cgaccggaggaatatgacatgcacaaccggaagcggcccaggattgattacaccccagaa
ttcccccaaagaccaggttttatgcaagatccccgaaatccacctgtggacaggcgcttt
tctggtgttagaagagacgtgtttcttaatggatcctacaacgactatatgagagaattc
catcacaacattgggcctccaccaccttggcaaggaatggccccgtaccctggtatggag
catcctcctcagcacccgtattaccagcaccaccctcctccaccccaggctcacccgcct
tactctggacaccaccccatgccccatgatgcccgcttcagggaaaagagggtcgtccgc
tctttcgcctccagtttgcatgattacgacatgcgcgtggatgattttctaaggcgaacg
caggcagtggtgagcggacgcagaagcagaccgcgggagagagaccgtcagagagagcgt
gaccgacccagagacggacggagagaccgagagcgagaacgtggacgggagcgggaccgc
gagagagagagaattcgagaccgcgagagagaaaaggagagaggccgataccgtagatag
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integrated database retrieval system
