Danio rerio (zebrafish): 557257 Help Entry 557257            CDS       T01004                                  Symbol col17a1a Name (RefSeq) collagen, type XVII, alpha 1a   KO K07603   collagen type XVII alpha Organism dre  Danio rerio (zebrafish) SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen Motif Other DBs NCBI-GeneID:  557257 NCBI-ProteinID:  NP_001139037 ZFIN:  ZDB-GENE-090313-107 Ensembl:  ENSDARG00000069415 UniProt:  B8A4S4 LinkDB All DBs Position 1:49568326..49606453 Genome browser AA seq 1408 aa AA seqDB search MDKLTTTKIVKVEGGSGGSGKEIQKHTETVTTTRLTSLPPKAHSGQQILTSIGNGSGSAG GAVLLEKKFITHSSAEGGASRSYVISSSSSGSSASSSSGAGSVISGFDGISGEISVTGPI TSSTVKSSTSAVKSSSVVSTSITSSSAAGGELSSGYGSISSSSSEFVSGSSGGSISTSEG SMSKSRSGGGSSAVMSGEGTSSSKTVSKFSSSSPSGTRKGLSYSTVPTERKTIMNITTGG YEGSSSGNSSPEYIKKDSAATRGRTQTRESEIRARLQSASPSARWTELDDVKRLLKGSRS GSISPPRSPTSTLPIPKKASIDVRHESQSGFDGTVLDAGFSGYYTNPNNLSYTTLQQPSS PTGGMQNNLTLSSSALDTTVYGMQNNLSTSGGAMMANGRCTGYVYGVPKNVGSAGLATTI SAIPSSPITADDVFMKDGKLIAIGKENVAAKTETERLIMSKNTGKQFVPSSFNAGADTFS EDSLKREKKMISSATDPQTTTITGSKSSTKNKATYADIRKDDSDGAGCGFWTCCSWWKWL LALLFALLLLLGLLCGLIALGEQLRRLKARVDAIDGGGTSPRTSGLKTDDIPGVQSGNTI NLGYEPAGQDSLILQRAILRELQSDTIRASLATSLRGERGEPGPKGDQGPPGVKGDSGFP GIPGPPGLIGHPGQEGPRGPKGSAGESGSDGLPGPRGREGPAGPRGEPGPPGIGEKGEKG SFGDVGAPGIAGPPGPVGPKGDAGAQGVPGLTGAPGPQGFRGDSGDPGPKGDKGPAGPPG VKGDQGERGPRGATGEPGQPGPAGPPGEKGLKGSTGAPGPDGVKGLRGDQGPVGLPGARG PSGPPGDSGIPGTPGLQGPPGLPGTPGQPGAKGEAGEPGRVISAGANANTVAVSGPPGPP GAPGPAGPPGLSGPIGPAGLPGSPGAKGDKGDKGEDGKPGVTESAGKKSEAGEPGPPGPP GPPGPPGDDGKPGVGEPGPAGPPGEKGEPGSFVPTSETFFAGPPGPPGPIGPKGSQGDVG PQGFPGQPGLPGEPGIGIPGQPGSPGPRGEQGLDGPLGPQGPQGPMGPMGPEGPKGDAGV PGAPGIPGYSYGGGSRSAPGPPGPPGPPGPPGEPGSQGDGSPNAVQQISDYLRSEPIRQY LAGPPGPPGPPGPSGSASDDALASRVIEYLQRDEVRQYLIGPPGPPGPPGVPGGYGFNTQ EVAGRVMSLINDAGFRGLPGPPGPPGPQGPPGNSGGLVSYAANENQQHIRAEPQEYIKSH PRADENLDYTAIAKQVSDYIKAHGLLNGNAGFPGAPGRQGYPGPPGFPGEPGTPGQPGPP GQAGPPGLPGPPGLDTVHNYSNMTAVLDYIKENHMKGQKGDLGFPGIPGSPGIDGKQGIV GLPGIKGQKGERGEATYVNRRRRRSTVI NT seq 4227 nt NT seq  +upstreamnt  +downstreamnt atggacaagctaacaacaaccaagattgttaaagttgaggggggatctggaggatctgga aaagaaatccagaaacatacagaaactgtgacgactacaagactgacatctctaccgcca aaagcccacagcggccagcagatactgacctccatcgggaacggctcaggatctgcagga ggagctgttttgctggagaagaagttcatcactcacagcagcgctgaaggaggagcttcc aggagttatgtcatatcatcctcctcatctggaagttcagccagcagcagctcaggagca ggatctgtgatcagtggatttgacggtatatctggcgaaatcagtgtaaccggaccgatc actagctctacggttaaaagctctacatctgcagttaaaagctctagcgtggtctctacc tccatcacatcctcgtcagccgcaggcggagagctttcctctggatacggctccatctcc tcatcctcctccgagttcgtgtctggttcctcaggaggatccatcagtacttctgaaggc agcatgagtaaatctagaagcggtggaggatcatctgcagtcatgtctggcgaaggaaca tccagctccaagactgtgtccaaattcagctcctcgtcccctagtggaacaaggaaaggt ttgagttacagcacagttcctactgagaggaagaccattatgaacattaccacaggagga tatgaggggagctccagtggcaattcctcccctgagtacataaagaaagacagtgctgcc accagagggcgcactcaaacacgagagagtgagatcagagccagactgcagagcgcctcg ccctccgctagatggacagagttggatgatgtgaagagattactgaagggaagtcgctct gggagcatcagtccaccacgttctcccaccagcactctccctatccccaaaaaagccagc attgacgtacgccacgagagccagtcaggctttgatggcacagttttggatgctggattc agtggatattacaccaatcccaacaatctcagttacaccacattgcaacaaccatcatca cccacaggcggcatgcaaaacaatctgaccctcagttcatctgcccttgatactacagtg tatgggatgcagaataacctgtctacatctggcggtgctatgatggctaatggaaggtgc actggctatgtgtatggggtcccgaaaaatgttggcagcgctggattggccactactatt tctgctattccaagcagtcctatcaccgctgatgacgtgtttatgaaagatggcaagtta attgcgattgggaaggaaaatgtagcggctaagacagagaccgagaggctgatcatgtcc aaaaacactggcaaacagttcgtcccttcatccttcaatgctggagcagacacgttttct gaagattcactcaagagggagaaaaagatgatctcgagcgccacagatccacagaccacc accattactggttccaaatcctcaacaaaaaacaaagcaacatatgcagatattcgtaaa gatgattccgacggcgctggatgtggattctggacgtgttgctcgtggtggaaatggctt ctggctttgttatttgctcttctccttctgctgggactcctctgtggactgatcgcacta ggtgagcagctgaggaggctgaaggctcgtgtggatgctatcgatggtggaggaacctct cctcgaaccagcggtttgaaaactgacgacattcctggggtccaatctggtaacacgata aacctgggttatgaacctgctgggcaagattcgttgatcctgcagagagctatcctgaga gagctgcagtcggacaccatcagagcatcgctggcaacttcgctcaggggagagagagga gaacctggacctaaaggagaccaagggcctcctggagttaaaggtgattcaggatttccc gggattccaggtcctcctggtcttattggtcatcctggacaggaaggccctcgaggaccc aaagggagcgcaggtgaatcaggaagtgatggtttacctggaccgaggggtcgtgaaggt ccagcgggtcccagaggagaaccaggacccccaggaattggggagaaaggagagaaaggc tcatttggtgatgttggcgctcctgggatagcaggaccaccaggacccgtagggcccaaa ggtgatgcaggtgcacaaggagtaccgggacttacaggagcacctggaccccaaggcttc cgcggagattctggtgatcccggacccaagggtgataaaggacctgctgggccacctggg gtcaaaggtgatcagggagagagaggaccacgtggcgccactggtgagccgggtcagcct ggaccagcaggtcctcctggtgagaaaggtcttaagggatcaacaggtgcaccaggacca gatggtgttaaaggacttaggggtgaccaaggacccgttgggttgcctggtgctcgagga ccatcaggacctcccggagattcaggaataccaggaacaccaggactccaaggaccacca ggactgccaggtacaccaggccaaccaggagctaaaggtgaggccggtgagcctggaaga gtcatttctgcaggcgctaatgctaacacggtggctgtatctggaccaccaggacctcct ggagctccaggtcctgctggtccacctggactatcaggtcctattggtcctgctggtctt cctggttcacctggtgcaaagggagataaaggagacaaaggagaggatgggaaacctgga gtcactgagagtgcagggaagaaatcagaagcaggggaacccggtcctccaggaccacca ggacctccaggaccacccggggatgatggaaagccaggtgttggagaacctggtccagct ggtcctcctggtgaaaaaggtgaacctggaagctttgtacctacttcagaaacattcttt gctggaccacctgggcctcctggacctattggaccaaagggatcacaaggtgatgttggc cctcaaggtttccctggtcaacctggattacctggagaacctggaattggtattccagga cagccgggatcaccaggaccacgtggagagcaaggtcttgatggtccacttggaccacag ggacctcaagggccaatgggtcccatgggcccagaaggtccaaaaggtgatgctggagtc ccaggtgcccctggtattccaggttattcttacggtggaggatccagaagtgctccggga ccaccaggtccacctggacccccagggcctcctggagaaccaggttctcaaggtgacggg tcaccgaatgctgttcaacagatttcagactacctcagaagtgagcccattagacaatac ctagctggacctccaggcccgcctggaccaccaggtccctctggatcagcctctgatgat gctctggctagcagagtcattgaatatcttcaacgagatgaggtgagacagtacctgatt ggtcctccaggacccccgggaccaccaggtgtgccaggtggatatggctttaacactcag gaagtggcaggacgagtgatgagccttattaacgatgctggttttagaggtttaccagga cctcccggcccaccaggacctcaaggacctcctggaaactctggaggactggtgtcttac gctgctaacgaaaaccagcagcacatccgcgcagagccgcaggagtacatcaagagccat ccaagggctgatgagaatttggattacacagccatcgctaaacaggtttcagattacatt aaggctcatggcctgttaaatggaaatgctggctttccaggtgcaccaggtcgtcaagga tatcctggaccaccagggtttccaggagagcccggaacaccaggacagcctggaccacca ggacaggctggaccaccaggactgcctggaccaccaggactcgacactgtacacaattac tccaacatgactgctgtcttggactacatcaaagaaaatcatatgaaaggacaaaaaggc gacctgggatttccaggaattccaggatccccaggtattgatggtaaacaaggcatagta ggcttaccaggcataaagggacaaaaaggagaaagaggtgaagcaacatacgtcaaccga aggaggaggaggagcacagtaatttag

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