Danio rerio (zebrafish): 560260
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Entry
560260 CDS
T01004
Symbol
si:ch211-79l20.4
Name
(RefSeq) protein virilizer homolog isoform X1
KO
K22910
protein virilizer
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dre03019
]
560260 (si:ch211-79l20.4)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
560260 (si:ch211-79l20.4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VIR_N
Motif
Other DBs
NCBI-GeneID:
560260
NCBI-ProteinID:
XP_005158091
ZFIN:
ZDB-GENE-100922-238
Ensembl:
ENSDARG00000075824
UniProt:
A0A8M2B4B7
LinkDB
All DBs
Position
16:26680481..26717597
Genome browser
AA seq
1850 aa
AA seq
DB search
MAGDSAMELLFLDTFKHQNAELTNVDVVRFPYGVLITEVRVIPPGIKAHSNLPDSRAFGE
TAPHAFQLDLFFNNVSKPNSPVFDRLGSLEYDENKSIIFRPNGKINTDGLVLRGWYTCLT
LAVYGTAERPHSHERDSPPPPPPPPPQQQQIGSKRLIKLEWENEDQFNGSPPRPQPRGPR
TPPGPPPPDDDDEEAMPAPGQCPVKVENTEHPGDDYLEPVSPERGSLPADETYSDAEQED
DEGPADEEEDDVQSEGTEGDEDDEEDEVGDDVTDEDGEGDDGYEQISSDEEDLESGAFKL
PAFDLDYTPEDLASLPTVQYDPYERELRPLQHFTPPHITRYEAELKRLKTVDIEDSSSSW
AESAAKLSELLEAWGEAQGAERGAGWVTALEEVPAFLVKGMSFLSIKDPDGQSEKLKQLV
DWSCEALSLDVALAQPIALNLRQLKAGTKLVSALADCGAQAVQDLLEKGIVGRLLGLLFA
EHVSSTLKLNVLRSLDSIISEPQGIEAMLRDRHHHDDDGTSGYQRLLDLFLLDQTVRVAT
AGAAILHKGHLYEVLTDLQKTASVWAERHPTVGEVAEREGSESEAGERDRESTEREGEER
ERETQEAERESPMDIDTLLESASLSEADLERLQGLLEELLHLLETAPHCMVQPPGKAFPT
NVRITGPPERDDPYPTLYRYMHACHLLESLGVVLSYPATCAHIGVLQAVRELMRFLSQSQ
QGLLFLLSQHETINLLLRLLTPLTHLTPPSHLAPLTPLSEVEGEEAAAGGEGLMDDGFWV
WLMQTLHALQGIAELNGAELEDGDNPDVLATLHSLYLISFSSTGRNAVAHTFSLDNNLSC
LINLIEFHAKDGQGDGKARKSVTYNYACMLVLLVIQTSSDLRMMEHYAAPLLLVCKADEN
NAKLQELSKWLEPLEKLHFDISGIPMLIDYIKQNLENLMTADGVGLVTALRVLCHIACPP
ATVPGQQKDLKWNQAIIALFSAEGMDTFIKVLQKLTSLLLLPWRLHGPMGPTAQRLMMLS
VASCSLRLIRAMLTELLCGGTCEFRDVRVPSVCVTLHKILCSTPSTGRLDAEELRIQGDV
TEILLTFTHAVSEQETGSEETVAGNSWSLMLKEVLNSILAAPENIYSSLSLLSELLPLPL
PMQTTQALSVQDIGVAMNTRKLWSVHLHAQARVLQEVLRCACVSSCPPLFSMLRRVCVQL
CDLAAPTATLVMRTLLEQLQEEMQQEAAGSRLIRVLALLDSLASQRACKVAMLALLSGSA
RSDTRSEGKVEDKLSDILPSLLAMLVLPADVGLSAQQNAELMASILQSLCDQDVSLVVSG
SGEASVSEAELLANALPTKEMMTSICEGMLDVLGNTHSSYTLQLTCLRTMMFLTEHDYGL
YHLKSSLKKHTTAISSLIRREITSFNKEFAELLSALFDFLRQILNSEAMFLRSAFYRHHH
ADEDMDSRSLALSVSDMKQLLQWKEDSGEHLLCELEKHITKLCKEDESLEALLENVVGLR
QIIESSGDAQTNAEPETEPSLPAPEPLQTQFNHRTVYVLSDVLDEQLKALWFSPFQPDEM
ETEVDMVKVDLVALAQQCCTELDLKAELERSFLSEPSSPGHSKPSKGFRLGKHKHETFIT
SRYTSGRSDYVEPAKRAHIMAAPRGRGRGSFGQLSRPHDIFRQRKQNTSRPPSMHVDDFL
AAEFKDVGPPTGLTLPKRPPKGGGAKPPTRGMFTGGTRGRGFQSHTRFFTPPAPKSVLLA
GNYPRREGGRGSTWSTPVTAVTHRGTYSEPRGGQSNFTRPLPSRQPPTGAYRLAPRDRAT
RGRGTGLSWLSAGVSVGGGGGVSGGGRGQGKFSSGGSGGGRGRHVRSFTR
NT seq
5553 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggattctgcaatggagctgctctttttagatacgttcaagcatcaaaatgca
gagctgacaaatgtggatgtggtgcggtttccttacggtgtcttgatcacagaagtgcgg
gtgattccccctggcatcaaagcacacagcaacctgcctgacagcagagcatttggggaa
actgcccctcacgcattccagttggacctgttcttcaacaatgtgtccaaacccaactcc
ccggtctttgacaggctgggcagccttgaatatgatgaaaacaaatcaatcatcttcagg
ccgaatggaaagataaacacagatgggctggttctgcgtggctggtacacatgcttgacg
ttggcggtgtatggtacagccgaacgccctcacagtcatgagcgggactctccaccgcct
cctccaccccctcctccccaacagcagcagatcgggtccaagaggctcattaagcttgag
tgggagaatgaagatcagtttaatggcagcccacccagaccacaacccagaggtccacgg
acaccaccaggaccacctcccccagatgatgatgatgaggaagcaatgcctgcacctggt
caatgtccagtgaaggtggagaacacagaacatccgggtgatgattacttggaacccgtt
tcacctgagcgaggatctcttcctgctgatgagacgtactctgatgcagagcaggaagac
gatgagggtccagctgatgaagaggaggatgatgtgcagtctgaaggaactgaaggggat
gaagatgatgaggaagatgaagtgggtgatgatgtgacagatgaagatggtgaaggtgat
gatggatatgagcagatatccagtgatgaggaggatttagagagtggggctttcaagctt
cctgcttttgacctggactatactcctgaagacctcgcctcactaccaactgtgcagtac
gacccatatgagcgtgaactcagaccccttcagcacttcaccccaccacacatcacacgc
tatgaggcagagctaaaacgcctcaaaacggtggacatcgaggactcgagctcctcatgg
gcagagtctgccgctaaactctcagaactcctggaggcctggggggaggcgcagggggcg
gagagaggtgcaggctgggtaactgctttagaggaagtccctgcctttctagtaaaagga
atgagcttcctgtctattaaggaccctgatgggcagagtgaaaagttgaagcaattggtc
gactggagctgtgaagctcttagtttggacgttgctctggcgcagcccatagcactgaac
ctgcgccagcttaaagcgggaaccaaactggtctctgccttggctgactgtggtgctcag
gctgtgcaggatctgctggagaaggggattgttggcaggctcctaggcctgctgtttgca
gaacacgtttcatccactctgaaactcaacgtgctgcgctccctcgacagcatcatcagc
gagccacagggcatcgaggctatgctcagagaccgccaccatcatgatgatgatggcaca
agcgggtatcagcgtctgctcgatctgtttctattggaccagactgttcgtgtcgcaact
gcaggtgcagccatattacacaaaggacatttatatgaggttttgactgacctgcagaaa
accgccagtgtttgggctgaacggcatcctactgtaggggaggtggctgagcgcgagggc
agcgagagcgaggctggagagagagacagagaaagcactgagagggaaggggaggagaga
gagagggaaacccaggaggcagagcgggaaagcccaatggacatcgataccttgttggaa
tctgcctctttgtcagaggctgacctggagaggctgcagggtctcctggaggaactgctc
cacctgctggaaacagcacctcactgtatggtgcagcctcctgggaaagcttttcccacc
aatgtccggatcactgggccaccagagcgagatgatccctatcctacactctacagatac
atgcatgcatgtcaccttctggaatctctgggagttgtcttgtcatatccagctacatgt
gcccacattggagttctacaggccgttcgagaactgatgcgtttcttgtcccagtcccag
cagggcctcctcttcctccttagtcaacacgaaaccattaatttgctgctccgcctcctc
acgccccttacccatctgaccccaccctctcatttggctccactgacgcccctttctgag
gttgagggggaagaagctgcagcaggtggagaggggctgatggatgatggcttttgggtg
tggcttatgcagactctacatgcactacagggtattgctgaattaaacggggcagagctt
gaagatggcgataatccagatgttttggcaacacttcacagtctgtatctcattagcttt
agcagcacgggccgaaatgctgttgcacacactttcagcttggataacaacctcagctgt
ctgataaacctgatagagttccatgccaaagatggccaaggggacggcaaagcaaggaaa
tctgtaacgtataactatgcctgtatgcttgtactgctggtgattcagacatcaagtgat
ctgcggatgatggagcactatgccgctccacttcttcttgtttgcaaagctgatgaaaac
aacgccaagcttcaagagctctctaagtggttggagccacttgaaaaattacatttcgat
atcagtggcattcctatgcttattgactacataaagcagaatctggagaacttgatgact
gcagatggtgtgggtcttgttactgctctcagagttctgtgccacattgcctgcccacca
gcaacagtgccaggccagcagaaagacttgaagtggaaccaggccatcatagctctcttc
agtgcagagggaatggacacttttattaaagtcctccagaagcttacatcactgttattg
ctgccatggcgactgcatgggccaatggggcccacagcgcaacgactcatgatgctgtca
gtggcctcctgctcgctgagactcatccgagccatgctgacagagctgctgtgcggggga
acctgcgagtttcgtgacgtgcgtgtgccctccgtctgtgtcacccttcacaagatcctc
tgctccaccccgtcaaccggccgcctggatgcagaggagctgcgtatccaaggagacgtg
acggagatcctgttgacgttcacacatgctgttagtgaacaggagacaggttctgaggag
accgtggctggcaacagctggtctctgatgctgaaggaagtgctgaactctattctggct
gctccagagaatatctatagtagtctcagtctgctgtctgaactacttcctcttcctctc
cccatgcagaccacacaggcgctgtcagtccaagacatcggggttgcgatgaacacacga
aagctgtggagtgtgcacttacacgctcaagctcgagtgttacaggaagtgctgaggtgc
gcgtgtgtgagcagttgtccgccgcttttctccatgctccgccgtgtgtgtgttcagctg
tgtgatcttgctgcacccacagccactctggtcatgaggacactgctggagcagctgcag
gaggagatgcaacaggaagcagctggctcgcgtttaataagggtactcgccctcctcgac
tccctggcatctcaacgggcctgcaaggtagccatgttggctctgctcagtggctctgca
cgcagtgacaccaggagtgaaggcaaagtggaggacaaactgtcagacattcttccctcg
ctgcttgcaatgctagtcctgccagcggatgtgggcctttcagcacagcagaacgctgaa
ctcatggcttccatccttcagtccctgtgtgaccaggacgtgtcgttagtagtgagcggt
tccggtgaagcgtcagtgtcggaggcggagctacttgccaatgcgctgccgaccaaagaa
atgatgaccagtatttgtgaggggatgctggacgtcttggggaacacacatagcagctac
acacttcaactcacatgtctgcgaactatgatgtttctcacagagcacgactacggtctc
tatcacctgaaaagctctttgaagaaacacacaacggccatttcctctctaatccgcaga
gaaattacgtccttcaacaaagagtttgcggagctcctttcagccctctttgactttttg
agacagattctgaacagtgaagctatgtttctcagatctgcattctataggcatcatcac
gcagatgaagacatggacagccgctctttggctcttagcgtgagtgacatgaagcagctg
ttgcagtggaaggaggactcgggagagcatctgctatgtgaactggagaaacatattacg
aagctctgtaaggaggacgagtctttggaggctctgcttgagaatgtagttggactgcga
cagattattgaaagttctggagacgcacagactaatgctgagcctgagactgagccctct
ctacctgcgcccgagccccttcagacacagttcaaccacaggacagtgtatgtactttct
gatgtcctggatgagcagttgaaggccctgtggttttctccattccagccagatgagatg
gagacagaagtagacatggtgaaagtagacctggttgcgctggcccagcagtgttgtaca
gaattagacctgaaggcagagttagagcgctcattcctcagtgaaccttcttctccagga
cacagcaaaccaagcaaaggcttcagactgggcaaacacaaacacgagacctttattaca
tccaggtacacaagcggaaggtctgactatgtggagccagcgaagcgagctcatatcatg
gcggcccctcggggtcgtggccgcggttcgtttggccagctctctcgaccacatgacatt
ttccgccagcgcaagcagaacaccagtcggcctccttccatgcatgtagatgatttcctg
gctgccgagttcaaggatgtgggtccaccaacaggactgacgctgcccaaacgcccacca
aagggtggaggagccaaaccccccaccagaggcatgttcactgggggaaccagaggaaga
ggcttccagagtcacacacgcttcttcactccaccggcccccaagagtgtgctgctcgct
ggtaactatcctcgtcgggaaggaggtcgtggatccacttggagcacaccagtgactgct
gttactcacagagggacttacagtgagcctcgtggaggacagagcaacttcactcgacca
cttccttccagacagccacctacaggtgcttacagactggctcctcgagacagggccacc
agaggcagagggacgggcctgtcctggctgagcgctggagtgagtgttggaggaggcggt
ggggtgagcggcggtggacgcggccaaggcaagttcagcagcggaggcagtggaggggga
cgaggccgacacgtccgctcattcactcgctaa
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