Maridesulfovibrio salexigens: Desal_2240
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Entry
Desal_2240 CDS
T00969
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dsa
Maridesulfovibrio salexigens
Pathway
dsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Desal_2240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsa03019
]
Desal_2240
03400 DNA repair and recombination proteins [BR:
dsa03400
]
Desal_2240
Enzymes [BR:
dsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Desal_2240
Messenger RNA biogenesis [BR:
dsa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Desal_2240
DNA repair and recombination proteins [BR:
dsa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Desal_2240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HTH_40
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
ACS80296
UniProt:
C6BWL6
LinkDB
All DBs
Position
2461003..2463225
Genome browser
AA seq
740 aa
AA seq
DB search
MSAPRTPLDVLRQTYGYESFRGLQEDVINRIMSGGNAVVFMPTGGGKSACYQIPAILRPG
VGIVISPLIALMRDQVAALQQMGVRAACLNSSVQPSEANHIIHELHSGNMDLLYVAPERL
AQPGFMDMLSGIKISLIAIDEAHCVAQWGHDFRPDYLRLSVFAEMFPSVPRLALTATADG
PTRNEILYRLSFSNEDIFATGFDRPNIRYTVIPKDQEKRQLLNFIKNEHFAECGIVYRMS
RKKVESTAEWLCKQGINALPYHAGLDAQTRESNQARFMSEDGVVMVATIAFGMGIDKPDV
RYVAHLDLPKTIEAYYQETGRAGRDGLPAEAWMSVGIQDIGFLKRMIMSGNSPDDRKALE
LRKLNALLAYCESPGCLRQSLLSYFGEELEEPCGNCFTCINPPSIFDGTIPAQKALSNIY
RTEQLFGANYLIDILLGKENKRISTQGHNSLSTYGIGKEFNSDEWLSIHRQLVSQGLVDV
DMEGYGSLKLNAKSWEVLRKERTVALRKDPVLAKSKTRRARKKLVIGDSNSPSLSTPEAH
ELLESLRSLRNTLAQEQHVPAYAIFADKTLLELGCYRPQTTGELYAVSGLGDQKIFRYGA
AIIEVLMDHQEKHGRPEDLFPIPEDKIKEVPTSTPKKEGPTVSASALETLELFEELMDIE
KVAESRNIKPATIYAHLTSCIGAGKVDVSDILDFDASELECLRDTLSFYKEEGFLQLSPV
FNGLCGNYSFEILRMVRASK
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaccacgcactcctttagatgtcctgcgccaaacctacggatatgaatcattc
cgtgggctgcaggaggacgtcatcaaccgcatcatgagcggcggcaatgccgttgttttt
atgcccaccggaggcggtaaatccgcctgttaccagattccggccatccttcggccgggg
gtgggtattgtcatttccccgctcatcgccctgatgcgcgatcaggtagcagccctgcaa
cagatgggagtgcgtgctgcctgcctgaattcatcggtacagccctccgaggccaaccat
atcatccatgaactgcatagcggaaacatggatctgctttatgtggcccctgagcggctg
gcccagcccggattcatggacatgctttcgggtatcaagatcagcctgatcgccattgac
gaggctcactgcgtagcccaatggggacacgatttccgtcccgattacctgcggctttcc
gtatttgcggaaatgtttcccagcgtgccgcgcctggcactgacggccacagccgacggc
ccgacccgcaatgaaatcctctaccgcttatccttcagcaacgaggatatttttgccacc
ggattcgaccgtccgaacatacgctataccgtaatccccaaggatcaggaaaaacggcaa
ttgctcaatttcatcaaaaacgagcactttgctgaatgcggcattgtctaccgcatgagc
cgcaaaaaagtggaatccaccgccgaatggctttgcaaacaaggtattaacgccctgcca
taccacgcgggactggacgctcaaacccgtgaatccaaccaagcccgattcatgtccgaa
gacggcgttgtcatggttgcgaccattgctttcggcatgggtatcgacaaaccggacgtg
cgctacgtagcccatctggatctgccaaaaaccatcgaagcctactatcaggaaacaggc
cgtgccggacgtgacggattgccagcggaagcatggatgtccgtaggaattcaggatatc
ggattcctgaaacgaatgatcatgtccgggaacagcccggatgaccgtaaagccttggaa
ctgcgcaagctcaacgccctgctcgcgtactgcgaatcaccgggatgcctgcgccaatcc
ctgctttcctacttcggtgaagaacttgaagagccgtgcggaaactgttttacctgcatc
aacccgccatcgatatttgacggaaccattccggctcaaaaggccctttcaaatatttac
cgcaccgagcagcttttcggagccaactacctgatcgatattttactgggcaaagaaaac
aaacgcatcagcacccaagggcataacagcttaagtacatacggtatcggcaaggaattt
aattcggatgaatggctttccatccaccgccagcttgtttcacaagggctggtggatgtt
gatatggaaggctacggatctctgaaactaaacgctaaaagctgggaagttctgcgcaag
gaacggactgtagccctgcgcaaagacccggtacttgccaaaagcaaaacccgccgagcc
cgtaaaaagctggtcatcggggattcgaacagcccttccctttccactccggaagcacat
gaacttctggaatcgctgcgttccctgcgcaacacactcgctcaggaacaacatgttccg
gcatatgcaatttttgcagataagaccctgctagaacttggttgctaccgcccacaaacc
acaggagaactctatgcggttagtggtttgggtgatcagaaaatattccgctatggagca
gccataattgaagtgctgatggaccatcaagagaaacatggaagacccgaggatcttttc
cccatcccggaagataagataaaagaagtccctacttcaacccccaagaaagaaggaccg
actgtttcagcttccgctctggaaacccttgaactgtttgaagagcttatggacatcgaa
aaagttgcagaatcccgcaacattaagcccgcaacaatttacgctcacctgacgtcctgc
attggagccggaaaagtagacgtaagcgacattctggatttcgatgcatcggaacttgaa
tgtctgcgagacactttatccttttataaagaagagggatttctgcaactaagcccggta
ttcaatggactttgcggcaactattcatttgaaatcctgcgtatggtccgcgccagcaaa
taa
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