KEGG   Dinoroseobacter shibae: Dshi_1055
Entry
Dshi_1055         CDS       T00612                                 
Name
(GenBank) ABC transporter related
  KO
K11072  spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
Organism
dsh  Dinoroseobacter shibae
Pathway
dsh02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:dsh00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    Dshi_1055
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:dsh02000]
    Dshi_1055
Enzymes [BR:dsh01000]
 7. Translocases
  7.6  Catalysing the translocation of other compounds
   7.6.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.6.2.11  ABC-type polyamine transporter
     Dshi_1055
Transporters [BR:dsh02000]
 ABC transporters, prokaryotic type
  Mineral and organic ion transporters
   Spermidine/putrescine transporter
    Dshi_1055
SSDB
Motif
Pfam: ABC_tran TOBE_2 AAA_21 SMC_N AAA_16 AAA_22 Mg_chelatase AAA_28 RsgA_GTPase AAA_29
Other DBs
NCBI-ProteinID: ABV92797
RoseoBase: Dshi_1055
UniProt: A8LSI3
LinkDB
Position
1088608..1089708
AA seq 366 aa
MRQTTPPAVEVKGLSKHYGPVKALRQVDLTIAAGEYFVLLGPSGGGKTTLLRTIGGFHRP
TEGQVLLHGRDMSHLPPDKRPTTMVFQAYALFPHMTVLQNVSYGLKVAGMDKATAQEKAA
AMMDVVGLAGFAERKPHELSGGQQQRVQLARALVLDRDILLLDEPLAALDAQLRKDMCLE
LKHLQEKVGITFIHVTHNQEEAMTVADRIALVADGQLVEQGAARDIYRAPIKKFTAGFVG
ENNLLSGTVSQVNGVSCMVEVAGAQLSVPKRGQEVTQGQAVDLSIRSELVQLSRVDASND
PGDGHSILGSYDEAVYLGLTTSHLVRLPNGVEMTSRTISDALGDLPTPGDPVRLSWQPDA
IRLHTS
NT seq 1101 nt   +upstreamnt  +downstreamnt
atgcgccagaccacaccacccgccgtcgaggtcaagggcctgtccaagcattacggcccc
gtcaaggccctgcgccaggtcgacctgaccatcgccgcgggggagtattttgtcctgctc
ggcccctctggcgggggcaagaccaccctcctgcgcaccatcggcggttttcaccgcccc
accgaggggcaggtcctgctccatggtcgcgacatgagccacctgccgcccgacaagcgc
cccaccaccatggtcttccaggcctacgccctcttcccgcatatgaccgtgctgcaaaac
gtgtcctacgggctgaaagtggcggggatggacaaggccaccgcccaggaaaaagccgcc
gccatgatggatgtcgtgggccttgcgggctttgccgagcgcaagccgcacgagctgtcc
ggtggccagcagcagcgggtgcagctggcccgcgcgctggtgctcgaccgcgatatcctg
ctcttggacgagccgctcgcagccctcgacgcgcagctgcgcaaggatatgtgcctggag
ctgaaacacctgcaggaaaaggtcggcatcaccttcatccacgtcacccacaaccaggaa
gaggcgatgaccgtcgccgaccgcatagcactcgtggccgatggccaactggtcgaacag
ggggccgcgcgcgacatctaccgcgcccccatcaagaaattcaccgctggcttcgtgggc
gagaacaacctgctctccggcaccgtgtcgcaggtcaacggcgtctcctgcatggtcgag
gtggcgggcgcgcagctttccgtgcccaagcgcgggcaggaggtgacccagggccaggcg
gtggatctctcgatccgctccgaactggtgcaactgtccagggtggatgcctccaacgat
ccgggcgacggccattccatcctcggcagctatgacgaggcggtctatcttggcctgacc
acctcgcatctggtgcgcctgcccaacggggtggagatgacgtcgcgcacgatctccgac
gcgctgggcgatctgcccaccccgggtgacccggtgcgcctgtcctggcagcccgacgcc
atccgcctgcacacgagctga

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