Dinoroseobacter shibae: Dshi_3006
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Entry
Dshi_3006 CDS
T00612
Symbol
rpe
Name
(GenBank) ribulose-phosphate 3-epimerase
KO
K01783
ribulose-phosphate 3-epimerase [EC:
5.1.3.1
]
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh00030
Pentose phosphate pathway
dsh00040
Pentose and glucuronate interconversions
dsh01100
Metabolic pathways
dsh01110
Biosynthesis of secondary metabolites
dsh01120
Microbial metabolism in diverse environments
dsh01200
Carbon metabolism
dsh01230
Biosynthesis of amino acids
Module
dsh_M00007
Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
Dshi_3006 (rpe)
00040 Pentose and glucuronate interconversions
Dshi_3006 (rpe)
Enzymes [BR:
dsh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.1 ribulose-phosphate 3-epimerase
Dshi_3006 (rpe)
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GFIT
Motif
Pfam:
Ribul_P_3_epim
OMPdecase
Motif
Other DBs
NCBI-ProteinID:
ABV94739
RoseoBase:
Dshi_3006
UniProt:
A8LKF6
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Position
complement(3171858..3172556)
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AA seq
232 aa
AA seq
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MPFDRSIKIAPSILAADFANFGAECAAVEAQGADWVHVDVMDGHFVPNITFGPATCAAIR
PHIKGVMDVHLMIAPVDPYIDAFADAGADVITAHLEAGPHIHRTLQAIRGAGAKAGLALN
PGTGLGDVGHLLDMVDLVCVMTVNPGFGGQKFLDMSAKIRDLRAMIGDRPIHIEIDGGVT
PQTAPLVAKAGADVLVAGSAVFKGGSVADPAPYGANIAAIRAAAEAATGVMA
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgccctttgaccgttccatcaagatcgccccgtccatcctcgccgcggatttcgccaat
ttcggggccgaatgcgcggcggtggaagcccagggcgccgactgggtccatgtggatgtg
atggacggccatttcgtgcccaacatcaccttcggtcctgcgacctgtgccgcgatccgg
ccccatatcaagggggtgatggatgtgcatctgatgattgcgccggtggacccctatatc
gacgccttcgccgatgcgggtgcggacgtgatcaccgcgcatctggaggccgggccccat
attcaccgcaccctgcaagcgatccgcggggccggggccaaggcggggctcgcgctcaac
ccgggcaccgggctcggggatgtgggccatctgctggacatggtcgacctcgtgtgcgtg
atgaccgtgaacccgggcttcggcgggcagaaattcctcgacatgtcggccaagatccgt
gacctgcgcgccatgatcggcgaccgccccatccatatcgagatcgacggaggtgtgacg
ccccagaccgcgcctctggtggccaaggccggggcggatgtgctggtcgcaggctcggcg
gtgttcaagggcggctcggtcgccgaccctgcgccttatggggccaatatcgccgcaatc
cgggccgctgcagaggccgcgaccggggtcatggcctga
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