Dinoroseobacter shibae: Dshi_3036
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Entry
Dshi_3036 CDS
T00612
Name
(GenBank) efflux transporter
Organism
dsh
Dinoroseobacter shibae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Patched
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
ABV94769
RoseoBase:
Dshi_3036
UniProt:
A8LKI6
LinkDB
All DBs
Position
complement(3203392..3206619)
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AA seq
1075 aa
AA seq
DB search
MNPVIKWMTEHPVAANLTMVLVLVVGLLSLFAIPQKTFPDFTLEVVDIRVVYPGASPGEI
EQSIIRPIEDQISGIDGVDEVTATAREGSGQVSVALLLGADVAEKLDEVKTEIDRITTFP
EDAEEPTVTQRSNRSRALEIAIHGPVPEQVLKEEAERLKSELTQLPSVSFVETANLRDYE
ISIEVDRDTLNAYGLTLAQVSQIVAANSLELPGGEIETATLSIPLRTLGRNYTRADFENI
VVLTNDAGAKVFLRDIATVIDGFEDSDISARFGGNPSATVNVFRVGDEQLLDIVSDVKVH
LDESFRASLPAGVDVTLWQNDADELQSRLDLLIENAVLGLALVVLCLTLFLDFRLAFWAA
AGIAVAFAASFAVLNTIGMSINMISLFGFILAIGIVVDNAIVIGENIYKNGEAGLSPMDA
AVKGTQRVAVPVVFSALTTVVAFMPLFEMPGTLGKFLGDIPAVVIIVLLLSLLQALFILP
RNLSRLDVSPSYRPNIVLRGLNAVRRVIDRGLQWFIARPFDAALRFATRYWLVPIGAVIG
MMIVTVGLLAHGYVKFNFFPAIDGKFVTANIEMVDGTTFDRTETVAEQVRVAAVRAGDRI
AADLPMDEAAVVENIAVVIGQGAGGGGPAGGTATTGATLANVVVRVTDPELRDWPTRDYV
AAWRDEIGDIAGIKVLDVSSALIDAGDAIAVELSLPDGQDIAPVVDALREGLRGIPGVFS
IRDDLSAGRLEYKLSLREDARIYGVTLSDLASQMRNGFFGIEATRVQRGRDDVRVFVRLP
ANQRDSLADLLDFKIRTAAGDLIALGDVAEITEGLAPTEILRRNARTITTVTADVDASVI
TSSEANALITAELIPPLAARYEGLIVEFGGEQRTQGDAGTALGKALAVALFVIFALLALV
FRSYVQPLVVMVAIPLGLIGAVMGHMIMGLPLTILSIFGIIGLAGVVINNSLVMIDLYNE
YLDKGHALRAAVIEGTKDRFRPILLTSLTTFLGVFPLIMETSLQAQFLIPLAVSIGYGVL
FGTAIILLAVPAVFIAQARAFDLVARLFGAAAPQLPEPAPDPLPASRLASVRAAE
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgaacccggtgatcaaatggatgaccgaacacccggtcgccgcgaacctgaccatggtg
ctggtgcttgtggtcgggcttctgagcctgttcgccatcccgcagaagacatttccggac
ttcaccctcgaagtggtcgatatccgcgtggtctatcccggggcctccccgggcgagatc
gagcagagcatcatccgcccgatcgaggaccagatcagcggcatcgacggtgtggacgag
gtcaccgccacggcgcgcgaaggctccggccaggtgtcggtggccctgctgctgggggcg
gatgtggccgagaagctcgacgaggtgaagaccgagatcgaccgcatcaccaccttcccc
gaggatgccgaggagccgaccgtcacccaacgctccaaccgctcccgcgctttggagatc
gcgattcacggcccggtgccggaacaggtgctgaaggaagaggccgagcggctgaaatcc
gagctgacccagctgccctcggtatcctttgtcgaaacggcgaacctgcgcgactacgaa
atttccatcgaggtggaccgcgacacgctcaatgcctatgggctgacactggcgcaggtc
agtcagatcgtcgctgcgaattcgctggaactgccgggaggcgagatcgaaaccgcgacc
ctgtcgatccccctgcgcacgctcgggcggaactacacccgcgcggatttcgagaacatc
gtggtgctgaccaatgatgcaggcgccaaggtgttcctgcgcgacatcgcgacggtgatc
gacgggttcgaggacagcgatatctccgcccggttcggcggcaacccttcggccacggtc
aacgtgttccgcgtgggcgacgagcagcttctggatatcgtgtcggatgtgaaggtgcat
ctggacgagagtttccgcgcctccctgccggcaggggtcgacgtgaccctctggcagaac
gatgcggacgagttgcagagccggctcgacctgctgatcgagaacgcggtgctgggcctg
gcgctggtggtgctgtgcctgacgctgtttctcgacttccggctggccttctgggcggcg
gcggggatcgcggtcgcctttgccgccagttttgcggtgctgaacaccatcggcatgtcg
atcaacatgatctcgctctttggcttcattctggccatcgggatcgtggtggataatgcc
atcgtgatcggtgagaacatctacaagaacggcgaggcggggctgagccccatggatgcc
gcggtcaagggcacccagcgcgtggcggtgccggtggtgttctcggcgctcaccacggtg
gtggcgttcatgccgctcttcgagatgccgggcacgctgggcaagttcctgggcgatatt
ccggcggtggtgatcatcgtgctgctcttgagcctgttgcaggcgctcttcatcctgccg
cgcaacctcagccgtttggacgtgtcgccgagctatcgccccaatatcgtgctgcgcggg
ctgaacgcggtgcgccgtgtgatcgaccggggcctgcaatggttcatcgcccggcccttc
gacgcggcactgcggtttgccacgcgctactggctggtgcccatcggggcggtgatcggc
atgatgatcgtgaccgtcgggttgctggcccatggatatgtgaagttcaatttcttcccg
gcgatcgacggcaagttcgtcaccgccaatatcgagatggtcgacggcaccaccttcgat
cgaaccgaaaccgtggccgagcaggtccgcgtcgccgccgtgcgggcgggcgaccggatc
gcggcggacctgcccatggacgaggcggcggtggtcgagaatatcgccgttgtgatcggg
cagggcgccgggggcggtggtcctgcgggcggcacggccacgacgggggcgaccctggcc
aacgttgtggtgcgcgtcaccgatcccgagctgcgcgactggccgacccgggattacgtc
gccgcctggcgcgacgagatcggcgatatcgccgggatcaaggtgctcgatgtgtcgtcg
gccctgatcgacgcgggcgatgccatcgcggtggagctgtccttgcccgacggccaggac
attgcgccggtggtggacgcattgcgcgaggggctgcggggtattcccggtgtgttttcg
atccgcgatgacctgtcggccgggcggctggagtacaagctgtccctgcgcgaggatgcc
cgtatctacggcgtgaccctgtcggacctggccagtcagatgcgcaacggcttcttcggg
atcgaggcgacgcgggtgcagcgcggccgggacgatgtgcgggtcttcgtgcgcctgccc
gcgaaccagcgtgacagcctcgcggaccttctagacttcaagatccgcaccgccgcgggc
gacctgatcgcgctgggcgatgtggccgagatcaccgaggggcttgcccccaccgagatc
ctgcgccgcaacgcccgcaccatcaccacggtcaccgccgatgtggatgcctcggtcatc
acgtccagcgaggccaacgcgctgatcaccgccgagctgatcccgcccctcgcggcgcgt
tacgaaggcctgatcgtggaattcggcggtgaacagcgcacccaaggcgatgcgggcacg
gccctgggcaaggcgctggccgtggcgctcttcgtgatctttgcactgctggcgcttgtg
ttccggtcttacgtgcagccgctggtggtgatggtcgcgatcccgctgggtctgatcggg
gcggtgatggggcacatgatcatggggctgcccctgacgatcctgtcgatcttcgggatc
atcgggctggctggtgttgtgatcaacaactccctggtgatgatcgacctctacaacgag
tatctggacaagggccacgccctgcgcgccgcggtgatcgagggcacgaaggaccggttc
cggccgatcctgctgacctcgctcacgaccttcctcggggtctttccgctgatcatggaa
acctcgctgcaggcgcagtttctgatcccgctggcggtgtccatcggctacggggtgctc
ttcggtacggcgatcatcctgctggcggttccggcggtgttcatcgcacaagcccgggcg
ttcgacctggtggcgcggctcttcggagcggccgcgccgcagctgcccgaacccgcaccc
gaccccttgcctgcgtcccgtctcgcctcggtccgggcggcggaatag
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