Drosophila simulans: Dsimw501_GD23438
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Entry
Dsimw501_GD23438 CDS
T01065
Symbol
Dsim_GD23438
Name
(GenBank) uncharacterized protein
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
dsi
Drosophila simulans
Pathway
dsi03008
Ribosome biogenesis in eukaryotes
dsi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Dsimw501_GD23438 (Dsim_GD23438)
09123 Folding, sorting and degradation
03018 RNA degradation
Dsimw501_GD23438 (Dsim_GD23438)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsi03021
]
Dsimw501_GD23438 (Dsim_GD23438)
03019 Messenger RNA biogenesis [BR:
dsi03019
]
Dsimw501_GD23438 (Dsim_GD23438)
03009 Ribosome biogenesis [BR:
dsi03009
]
Dsimw501_GD23438 (Dsim_GD23438)
03016 Transfer RNA biogenesis [BR:
dsi03016
]
Dsimw501_GD23438 (Dsim_GD23438)
Transcription machinery [BR:
dsi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
Dsimw501_GD23438 (Dsim_GD23438)
Messenger RNA biogenesis [BR:
dsi03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
Dsimw501_GD23438 (Dsim_GD23438)
Ribosome biogenesis [BR:
dsi03009
]
Eukaryotic type
Pre-60S particles
RNases
Dsimw501_GD23438 (Dsim_GD23438)
Transfer RNA biogenesis [BR:
dsi03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
Dsimw501_GD23438 (Dsim_GD23438)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-ProteinID:
KMY88643
FlyBase:
FBgn0194821
UniProt:
A0A0J9QXD3
LinkDB
All DBs
Position
2L
Genome browser
AA seq
903 aa
AA seq
DB search
MGVPAFFRWLSRKYPSVIIECNENKQVDPDTGRNIYEDATLPNPNGIEFDNLYLDMNGII
HPCTHPEDKPAPKNEDEMMVAIFECIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSRRF
RAAKETTEKRLEVARIREELLSRGCKLPPEKEKGDHFDSNCITPGTPFMDRLSKCLHYFV
HDRLNNNPAWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVLCGADADLIM
LGLATHEPNFTIIREEFLPNKPRPCDICNGFGHEMDKCVGLGATAPTSANFKPDVPIGAE
VKFIFVRLSVLREYLKQTLEMPNLPFEYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG
AVDRLVELYKKCVYKTKGYLTDSGDVNLDRVQLIMTDLGNAEDQIFKSRQRREEQFKARD
KARKRQERNQDHGSLNQSAFGASAVGPNSQQKSVGNYKEEAAALRNRKRTSDMANLDDED
EEENNDEVRLWEDGFKDRYYESKFDVAPGNQQFRYAVALQYVRGLCWVLKYYYQGCASWN
WYFPYHYAPFASDFVNIQGLSTMFEKGTKPFNPLEQLMGVFPAASSSHVPEPWAKLMSDP
ESPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALVPYYDQLTGEEVKRNKRGD
NYLYISNQSPHYKKVKKVSEKDDESVCKAISFDGMRGTLGSTELNTAISGILKSPISGLS
DINDNITVTTTFKDPEYDDDYIFEAKRLENAVDPPQVLPNEQSGNKHRPVIGFNSHLTRA
YVPDSGHRMLNAGIRNQQGGGGGGGYGQGGGYGQGGGGNQGQGYQNNSRNYNYNYNNNYN
QHQGGGYQNNYNNRQQQYGHNQRFNQDNSNQQQRNFNNYNGPRNNNYQQQGGSRQQNQNY
RRF
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgggagttccagcattctttcgctggctgagccggaagtatccatccgtgataatagaa
tgcaatgaaaacaagcaggtggacccggacaccgggcgaaacatctacgaggacgccacc
ttgccgaatccgaatgggatagagtttgacaatctgtacctggacatgaacggcatcata
catccgtgcacgcatccggaggacaagccggcgccgaagaacgaggacgagatgatggtg
gccatcttcgagtgcatcgaccgtctgttcggcattgtgcgtccccggaaactgctctat
atggccatcgacggagtggctccacgagccaagatgaatcagcagcgatctcgtcgcttc
cgggcagccaaggaaaccaccgaaaagcgactggaggtagcacggatccgagaggagctg
ttgagccgtggctgcaagctgccaccggagaaggagaagggtgatcactttgactccaac
tgcattacgccgggcaccccgttcatggaccgactgagcaagtgtttgcactattttgtt
catgatcgtctaaacaataacccggcctggaagggcatcaaggtgatcctgtcggacgcc
aatgtgcccggtgagggtgagcacaagattatggattacatccgtaagcagcgtgcccag
ccggatcacgatcccaacacgcagcacgtcttgtgcggagccgacgccgatctcatcatg
ttggggctggccacgcatgagcccaacttcaccatcattcgggaggagttcctgccgaat
aagccgcgtccctgcgacatctgcaacggatttggccacgagatggacaagtgtgtcgga
ctcggagcgactgccccaaccagcgccaactttaagcccgatgtgcccatcggcgccgag
gtaaagttcatctttgtgcggctgagtgtgctgcgcgagtacctgaagcagactcttgag
atgccgaatctgccatttgagtacagcttcgagcgcgcgttggacgactgggtgttcatg
tgcttctttgtgggcaacgattttttgccccacttgcctagcctggagattcgcgagggt
gcagtggatcgcctggtggagctatacaagaagtgcgtttacaagacaaagggctatctc
accgactcgggagatgtaaatctggaccgggtgcagctgattatgaccgacttgggcaat
gccgaggaccagatcttcaagagccgacagcgacgcgaggagcagttcaaggccagggac
aaggcgcgcaagaggcaggaaaggaatcaggaccacggatccttgaatcagtctgctttt
ggcgccagcgcagtgggtccaaacagccagcaaaagagcgtcggcaactacaaggaggag
gccgccgcactccgtaataggaaacggacgagtgacatggccaatttggatgacgaagat
gaggaggagaataacgacgaggtgcgattgtgggaggacggcttcaaggaccgctactac
gaatccaagtttgatgtggcaccgggtaaccagcagttccgatacgctgtagccctgcag
tatgtccgaggattgtgctgggttctgaagtactactaccagggctgtgcctcctggaac
tggtacttcccataccactatgcacccttcgcatcggattttgtcaacatccaggggctg
tccacgatgttcgaaaagggcacaaagccgtttaatccgctcgagcaactgatgggcgtc
tttccggcagccagtagttcgcacgtgcccgagccatgggccaagctcatgtccgacccg
gagtcgccgatcattgacttctatccggaggactttaagatcgatctgaatggcaagaag
ttcgcctggcagggagtggctctgctgccgttcgtcgatgagaagcgtctcttcaaggct
ttggttccctactatgatcaacttactggagaggaggtgaagcgaaacaagcgtggagac
aattacctgtacatcagcaaccagagtccgcactacaaaaaggtgaagaaagtcagcgaa
aaggatgatgagagcgtttgcaaagccatctcatttgacggtatgcgcggcactttggga
agtaccgagctaaacactgccatcagcggcattcttaagtcgccgatttccgggctatcg
gacatcaatgacaatataaccgtgacgaccacgttcaaggatccggaatacgatgatgac
tacattttcgaagcgaagcgcctcgaaaatgccgtagatccgccacaggtgctgccaaat
gagcagtctggtaacaagcatcgtcccgtcatcggttttaatagccacttgaccagggcc
tacgttccggatagtggtcaccgcatgctgaacgctggcataaggaaccaacaaggtggt
ggtggaggaggaggctacggtcaaggaggcggctacggccagggaggaggcggaaaccaa
ggacagggctatcaaaacaatagccgaaactataactacaactacaacaataactacaat
cagcaccagggtggcggctatcaaaacaactacaataaccgacagcagcaatatggtcac
aatcagagattcaaccaggacaattccaatcagcagcagcgcaactttaacaactataat
ggtccaaggaacaacaactaccagcaacaaggcggcagcagacaacagaatcagaattat
agacggttttag
DBGET
integrated database retrieval system
