Dichomitus squalens: DICSQDRAFT_130383
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Entry
DICSQDRAFT_130383 CDS
T03133
Name
(RefSeq) DNA/RNA polymerase
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
dsq
Dichomitus squalens
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
dsq03029
]
DICSQDRAFT_130383
Enzymes [BR:
dsq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DICSQDRAFT_130383
Mitochondrial biogenesis [BR:
dsq03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
DICSQDRAFT_130383
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
PPR_2
Motif
Other DBs
NCBI-GeneID:
18834632
NCBI-ProteinID:
XP_007371351
JGI:
130383
UniProt:
R7SIE2
LinkDB
All DBs
Position
Unknown
AA seq
1273 aa
AA seq
DB search
MPSPSGSEKRPSSIHADMHGFLNRRSPYTILPTPTPEDVISQPGDIFFTDSPTQDQVSVI
EACLRGLHDVPRAKGIFERLRSTRQGDPILEARMYNSFIEAYLEMAHREELNRPNWLEDA
WALYNDMERGHEKVDPTPNTYALMLQAWLRYNPDSSRQPVYISGAEVHDPVSLLRNIIGR
QISPALVVSDRAFTSNEEATEAIKALSKAAAEMGLASVVNELGLTEFLGKQIEDPLEDVP
EVVPVMRPKKIEVVQHDDGRVTQLATDEPLPERAQGEVPFNLETLRRHLSQVVLARRVLS
EDVAARQRLLEQSVYNVAVERMKHQAEMMDQLGLPSKGLQSNDLKSWMWEWHQKLQQRIK
AEVENLIVEERILARMKRRSTKSEEILLSPFLRMLSPEKLSLITIMEMMNLHGSGGVQDG
MKTARALLSVGRAVEAEHKAEICKKNNISIPVPAVNAPRAGVQNIFTGDGYKDLYARRVT
AAKYMEDAEEWTSDWSQLIRVKVGSFLLDCIMDVATVSRTIQDPRTGEKFTEEQPAFSHS
YEYQRGRKLGVIKFNPAVADRMSKDPIADTLHPRHLPMLVKPKPWLSYNNGGYLYSRSWA
MRFKDSREQEIYLRHASEAGRLELVFAGLDVLGSTPWQINRRVFDVVLQVWNSGERFAKI
PPAIPDEPEPVRPENMDTDNKAKVVYLERQRQWMQNKAANHSDRCSVNYKVEIARAFLGD
TIYLPHNVDFRGRAYPIPPHLSHIGDDLSRGLLIFEEKKPLGTRGLRWLKIHLANLYGYD
KASFDERVEYVHKHLEDIFDSADKPLEGRRWWTKADDPWQCLATCMELTSALRSPDPEAY
ECGLPVHQDGTCNGLQHYAALGGDAQGAAQVNLAAADRPSDVYTYVANMVEKQIEEDIKK
DDPIAKLLEGKVSRKVVKQTVMTTVYGVTYVGARDQIERQLKDRGDIPAEMCWSASAYLA
KNVLASIGDLFKGAKDIQNWLNLCARLIAKAIPQDRLVQSFTEPEKPNARSRKKEPRWKK
EQMTSVVWTTPLGLPIVQPYRAVKRKQVMTSIQTVFISDPTSPSTVNAQKQASAFPPNFI
HSLDATHMMLTALECRARGLTFASVHDSYWTHASSIDQMSEIIRDTFIALHSSDVLKGLY
DEFRERYADYKIPLVSLRGNAFKKLNLAPEQLGLTSEDTKLLTEGVAEDEEMLDEDALAL
DEDEDELEALTEVEQEKPKKVVRKRGPRKIKSEADIEARLAGRFINLVDVLPPLPEKGKF
DVKAIKESQYFFS
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgccgtctggctcagagaagcggccttcgtccatccacgctgacatgcatggc
ttcctcaaccgacgcagtccctacaccatcctacctactcccactccggaggacgtcatc
tctcaacccggcgacatattcttcaccgactcgccgacccaggaccaggtctccgtcata
gaagcgtgtcttcgcggccttcatgacgtcccgcgcgcgaagggtatctttgagcgtttg
cgttcgacacggcaaggtgaccctatcctcgaggcccgcatgtacaattccttcatcgag
gcgtacctggagatggcccatcgcgaagagctcaaccgcccgaactggctcgaggatgct
tgggcactgtacaacgacatggagcgtgggcacgagaaggtcgatccgacgccgaataca
tacgcgctcatgctccaggcctggctgaggtacaacccggattcctcgagacagcctgtc
tatatcagtggagcagaggtgcacgaccctgtgtcgctgttgcgcaacatcatcggccgg
cagatatcccccgcgttggtcgtgtctgatagggcgttcacgtcgaacgaagaggcgacg
gaggcaatcaaggctttgtcgaaagctgcggcggagatggggctggcgagcgtggtgaat
gagcttggtcttacggagttcctgggcaagcagatcgaggacccgttggaggacgtcccg
gaggttgttcccgtgatgcggccgaagaaaatcgaggttgtccagcatgacgacgggagg
gtcacgcagcttgcgactgacgaaccgctgccagagcgcgctcagggcgaagttccgttc
aatctcgagactcttcgacgacacttgtcgcaggttgtgctcgcgcgacgagtgctgtcg
gaagacgtcgcagctcgtcagcgactactggagcagtcagtctacaacgtagctgtcgag
cggatgaaacatcaggcggagatgatggaccagctcgggctgccgagcaagggcctccag
tcgaacgacctgaagtcatggatgtgggagtggcatcaaaagctacagcagcggatcaag
gccgaggtagagaacctgatcgtcgaggagcgcatcctggctcgtatgaaaaggcgttcg
accaagtccgaagagatcctattgagcccctttctccgcatgctctcccccgagaagctg
tcgctgatcacgatcatggaaatgatgaatctgcatggctcggggggcgtccaggacggg
atgaagaccgcgcgggcgctgctgtcggtcggccgggcggtcgaggcggagcacaaggcg
gagatttgcaagaagaacaacatctcgatccccgtgcctgcagtgaacgcaccgcgggcg
ggcgtccagaacatctttacgggcgatgggtacaaggatctgtacgcgaggagggtgacg
gcggcgaagtacatggaggatgcggaggagtggacgtcggattggtcgcagctgattcgt
gtgaaggtggggagcttcttgctcgattgcatcatggacgtcgcaaccgtcagccgaacc
atacaggaccctcggacgggcgaaaagttcaccgaggagcagcccgcgttttcgcactcg
tacgagtaccagcgcggccgcaagcttggggtgatcaagttcaaccccgcggtcgcggat
cggatgtcgaaggatccgattgcggacaccctgcacccgcggcacctgccgatgctcgtc
aagccgaagccgtggttgagctacaacaacggcggctatctgtacagccggtcgtgggcg
atgcgcttcaaggattcgcgcgagcaggaaatctatctccggcacgcatctgaagcgggc
cggctcgagcttgtcttcgctggccttgatgtgctcggcagcacgccgtggcagattaac
cgccgagtgttcgacgtcgtgctccaggtgtggaattcgggcgagcggttcgccaagatt
cccccggcgatcccggacgagcccgagccagtccgtccagaaaatatggacacagacaac
aaggccaaggtggtatacctagagcggcagaggcagtggatgcagaacaaggccgcgaac
cactcggaccggtgcagcgtgaactacaaggtcgagattgcgcgtgcattcctcggggac
acgatttacctgccgcacaatgtcgacttccgcgggcgtgcgtacccgatccccccgcat
ttgtcgcacatcggcgacgatctgagccgcgggttgctcatctttgaagagaagaagccg
ctcgggacccggggtctccggtggctcaagattcatctagcaaacctgtatgggtacgac
aaggcgagcttcgacgagcgcgtcgagtacgtccataagcacctcgaggacatcttcgac
agtgcggacaaaccgctcgagggccgaaggtggtggacgaaggcggacgacccctggcag
tgcctcgcaacgtgcatggagctcacatctgcgctgcgctccccagacccggaggcttat
gagtgcggactgcccgtccaccaggacgggacgtgcaacggactgcagcactatgctgcg
ctgggcggagacgcacagggtgcagcgcaggttaacttggcggcagcggatcggccgtca
gacgtgtacacgtatgtcgccaacatggtcgagaagcaaattgaggaagacatcaagaag
gacgaccccatagcaaagcttctcgagggcaaggtgtctcgtaaggttgtcaagcagacg
gtcatgaccaccgtctacggcgtcacctacgttggtgcgcgcgaccagatcgagcgtcag
ctcaaagaccgcggcgacattcctgcagagatgtgctggagcgcgtctgcctatctcgcc
aagaacgttctggcgtccatcggcgatctcttcaagggcgcgaaggacattcagaactgg
ttgaacctgtgcgcacgcctgattgcgaaggcgatcccgcaggaccgcctcgtccagtcg
ttcaccgagcctgagaagccgaacgcgcggtcgcgcaagaaggagccgcggtggaagaag
gagcagatgacgtccgtcgtgtggacgacgccgctcggattgccgatcgtccagccgtac
cgcgcggtaaagcgcaagcaggtgatgacgtcgatccagacggtgttcatctcggacccg
acgagcccgtcgacggtgaatgcgcagaagcaggcgtcggcgttcccgcccaacttcatc
cacagcctcgacgcgacgcatatgatgctcaccgcgctcgagtgccgtgcgcgggggctg
acttttgcctcagtccacgactcgtactggacgcacgcatcgagcatcgaccagatgtcg
gagatcatccgggatacgttcatcgcgctccactcatctgacgtgctcaagggcctctat
gacgagttcagggagcgttatgcggactacaagatcccgctcgtgagcctccgcggaaat
gcgttcaagaagctcaaccttgcccccgaacaactcggtttgacctcggaagacacgaag
ctgctcacagagggagtcgctgaggacgaggagatgctcgatgaggacgccctcgcactt
gatgaggatgaggacgagcttgaggcgctgacggaggttgaacaggagaagccaaagaag
gtggttaggaagcgcgggccgcgcaagatcaagtctgaggccgacatcgaggcgcgcttg
gcgggccggttcatcaatctcgtcgatgtcctgccgccactgcctgaaaagggcaagttc
gacgtcaaggcgatcaaggaatcgcagtatttcttctcataa
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integrated database retrieval system