KEGG   Dichomitus squalens: DICSQDRAFT_130383
Entry
DICSQDRAFT_130383 CDS       T03133                                 
Name
(RefSeq) DNA/RNA polymerase
  KO
K10908  DNA-directed RNA polymerase, mitochondrial [EC:2.7.7.6]
Organism
dsq  Dichomitus squalens
Brite
KEGG Orthology (KO) [BR:dsq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:dsq03029]
    DICSQDRAFT_130383
Enzymes [BR:dsq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     DICSQDRAFT_130383
Mitochondrial biogenesis [BR:dsq03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Mitochondrial RNA polymerase
    DICSQDRAFT_130383
SSDB
Motif
Pfam: RNA_pol RPOL_N PPR_2
Other DBs
NCBI-GeneID: 18834632
NCBI-ProteinID: XP_007371351
JGI: 130383
UniProt: R7SIE2
LinkDB
Position
Unknown
AA seq 1273 aa
MPSPSGSEKRPSSIHADMHGFLNRRSPYTILPTPTPEDVISQPGDIFFTDSPTQDQVSVI
EACLRGLHDVPRAKGIFERLRSTRQGDPILEARMYNSFIEAYLEMAHREELNRPNWLEDA
WALYNDMERGHEKVDPTPNTYALMLQAWLRYNPDSSRQPVYISGAEVHDPVSLLRNIIGR
QISPALVVSDRAFTSNEEATEAIKALSKAAAEMGLASVVNELGLTEFLGKQIEDPLEDVP
EVVPVMRPKKIEVVQHDDGRVTQLATDEPLPERAQGEVPFNLETLRRHLSQVVLARRVLS
EDVAARQRLLEQSVYNVAVERMKHQAEMMDQLGLPSKGLQSNDLKSWMWEWHQKLQQRIK
AEVENLIVEERILARMKRRSTKSEEILLSPFLRMLSPEKLSLITIMEMMNLHGSGGVQDG
MKTARALLSVGRAVEAEHKAEICKKNNISIPVPAVNAPRAGVQNIFTGDGYKDLYARRVT
AAKYMEDAEEWTSDWSQLIRVKVGSFLLDCIMDVATVSRTIQDPRTGEKFTEEQPAFSHS
YEYQRGRKLGVIKFNPAVADRMSKDPIADTLHPRHLPMLVKPKPWLSYNNGGYLYSRSWA
MRFKDSREQEIYLRHASEAGRLELVFAGLDVLGSTPWQINRRVFDVVLQVWNSGERFAKI
PPAIPDEPEPVRPENMDTDNKAKVVYLERQRQWMQNKAANHSDRCSVNYKVEIARAFLGD
TIYLPHNVDFRGRAYPIPPHLSHIGDDLSRGLLIFEEKKPLGTRGLRWLKIHLANLYGYD
KASFDERVEYVHKHLEDIFDSADKPLEGRRWWTKADDPWQCLATCMELTSALRSPDPEAY
ECGLPVHQDGTCNGLQHYAALGGDAQGAAQVNLAAADRPSDVYTYVANMVEKQIEEDIKK
DDPIAKLLEGKVSRKVVKQTVMTTVYGVTYVGARDQIERQLKDRGDIPAEMCWSASAYLA
KNVLASIGDLFKGAKDIQNWLNLCARLIAKAIPQDRLVQSFTEPEKPNARSRKKEPRWKK
EQMTSVVWTTPLGLPIVQPYRAVKRKQVMTSIQTVFISDPTSPSTVNAQKQASAFPPNFI
HSLDATHMMLTALECRARGLTFASVHDSYWTHASSIDQMSEIIRDTFIALHSSDVLKGLY
DEFRERYADYKIPLVSLRGNAFKKLNLAPEQLGLTSEDTKLLTEGVAEDEEMLDEDALAL
DEDEDELEALTEVEQEKPKKVVRKRGPRKIKSEADIEARLAGRFINLVDVLPPLPEKGKF
DVKAIKESQYFFS
NT seq 3822 nt   +upstreamnt  +downstreamnt
atgccgtcgccgtctggctcagagaagcggccttcgtccatccacgctgacatgcatggc
ttcctcaaccgacgcagtccctacaccatcctacctactcccactccggaggacgtcatc
tctcaacccggcgacatattcttcaccgactcgccgacccaggaccaggtctccgtcata
gaagcgtgtcttcgcggccttcatgacgtcccgcgcgcgaagggtatctttgagcgtttg
cgttcgacacggcaaggtgaccctatcctcgaggcccgcatgtacaattccttcatcgag
gcgtacctggagatggcccatcgcgaagagctcaaccgcccgaactggctcgaggatgct
tgggcactgtacaacgacatggagcgtgggcacgagaaggtcgatccgacgccgaataca
tacgcgctcatgctccaggcctggctgaggtacaacccggattcctcgagacagcctgtc
tatatcagtggagcagaggtgcacgaccctgtgtcgctgttgcgcaacatcatcggccgg
cagatatcccccgcgttggtcgtgtctgatagggcgttcacgtcgaacgaagaggcgacg
gaggcaatcaaggctttgtcgaaagctgcggcggagatggggctggcgagcgtggtgaat
gagcttggtcttacggagttcctgggcaagcagatcgaggacccgttggaggacgtcccg
gaggttgttcccgtgatgcggccgaagaaaatcgaggttgtccagcatgacgacgggagg
gtcacgcagcttgcgactgacgaaccgctgccagagcgcgctcagggcgaagttccgttc
aatctcgagactcttcgacgacacttgtcgcaggttgtgctcgcgcgacgagtgctgtcg
gaagacgtcgcagctcgtcagcgactactggagcagtcagtctacaacgtagctgtcgag
cggatgaaacatcaggcggagatgatggaccagctcgggctgccgagcaagggcctccag
tcgaacgacctgaagtcatggatgtgggagtggcatcaaaagctacagcagcggatcaag
gccgaggtagagaacctgatcgtcgaggagcgcatcctggctcgtatgaaaaggcgttcg
accaagtccgaagagatcctattgagcccctttctccgcatgctctcccccgagaagctg
tcgctgatcacgatcatggaaatgatgaatctgcatggctcggggggcgtccaggacggg
atgaagaccgcgcgggcgctgctgtcggtcggccgggcggtcgaggcggagcacaaggcg
gagatttgcaagaagaacaacatctcgatccccgtgcctgcagtgaacgcaccgcgggcg
ggcgtccagaacatctttacgggcgatgggtacaaggatctgtacgcgaggagggtgacg
gcggcgaagtacatggaggatgcggaggagtggacgtcggattggtcgcagctgattcgt
gtgaaggtggggagcttcttgctcgattgcatcatggacgtcgcaaccgtcagccgaacc
atacaggaccctcggacgggcgaaaagttcaccgaggagcagcccgcgttttcgcactcg
tacgagtaccagcgcggccgcaagcttggggtgatcaagttcaaccccgcggtcgcggat
cggatgtcgaaggatccgattgcggacaccctgcacccgcggcacctgccgatgctcgtc
aagccgaagccgtggttgagctacaacaacggcggctatctgtacagccggtcgtgggcg
atgcgcttcaaggattcgcgcgagcaggaaatctatctccggcacgcatctgaagcgggc
cggctcgagcttgtcttcgctggccttgatgtgctcggcagcacgccgtggcagattaac
cgccgagtgttcgacgtcgtgctccaggtgtggaattcgggcgagcggttcgccaagatt
cccccggcgatcccggacgagcccgagccagtccgtccagaaaatatggacacagacaac
aaggccaaggtggtatacctagagcggcagaggcagtggatgcagaacaaggccgcgaac
cactcggaccggtgcagcgtgaactacaaggtcgagattgcgcgtgcattcctcggggac
acgatttacctgccgcacaatgtcgacttccgcgggcgtgcgtacccgatccccccgcat
ttgtcgcacatcggcgacgatctgagccgcgggttgctcatctttgaagagaagaagccg
ctcgggacccggggtctccggtggctcaagattcatctagcaaacctgtatgggtacgac
aaggcgagcttcgacgagcgcgtcgagtacgtccataagcacctcgaggacatcttcgac
agtgcggacaaaccgctcgagggccgaaggtggtggacgaaggcggacgacccctggcag
tgcctcgcaacgtgcatggagctcacatctgcgctgcgctccccagacccggaggcttat
gagtgcggactgcccgtccaccaggacgggacgtgcaacggactgcagcactatgctgcg
ctgggcggagacgcacagggtgcagcgcaggttaacttggcggcagcggatcggccgtca
gacgtgtacacgtatgtcgccaacatggtcgagaagcaaattgaggaagacatcaagaag
gacgaccccatagcaaagcttctcgagggcaaggtgtctcgtaaggttgtcaagcagacg
gtcatgaccaccgtctacggcgtcacctacgttggtgcgcgcgaccagatcgagcgtcag
ctcaaagaccgcggcgacattcctgcagagatgtgctggagcgcgtctgcctatctcgcc
aagaacgttctggcgtccatcggcgatctcttcaagggcgcgaaggacattcagaactgg
ttgaacctgtgcgcacgcctgattgcgaaggcgatcccgcaggaccgcctcgtccagtcg
ttcaccgagcctgagaagccgaacgcgcggtcgcgcaagaaggagccgcggtggaagaag
gagcagatgacgtccgtcgtgtggacgacgccgctcggattgccgatcgtccagccgtac
cgcgcggtaaagcgcaagcaggtgatgacgtcgatccagacggtgttcatctcggacccg
acgagcccgtcgacggtgaatgcgcagaagcaggcgtcggcgttcccgcccaacttcatc
cacagcctcgacgcgacgcatatgatgctcaccgcgctcgagtgccgtgcgcgggggctg
acttttgcctcagtccacgactcgtactggacgcacgcatcgagcatcgaccagatgtcg
gagatcatccgggatacgttcatcgcgctccactcatctgacgtgctcaagggcctctat
gacgagttcagggagcgttatgcggactacaagatcccgctcgtgagcctccgcggaaat
gcgttcaagaagctcaaccttgcccccgaacaactcggtttgacctcggaagacacgaag
ctgctcacagagggagtcgctgaggacgaggagatgctcgatgaggacgccctcgcactt
gatgaggatgaggacgagcttgaggcgctgacggaggttgaacaggagaagccaaagaag
gtggttaggaagcgcgggccgcgcaagatcaagtctgaggccgacatcgaggcgcgcttg
gcgggccggttcatcaatctcgtcgatgtcctgccgccactgcctgaaaagggcaagttc
gacgtcaaggcgatcaaggaatcgcagtatttcttctcataa

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