Dichomitus squalens: DICSQDRAFT_138696
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Entry
DICSQDRAFT_138696 CDS
T03133
Name
(RefSeq) leucine-tRNA ligase
KO
K01869
leucyl-tRNA synthetase [EC:
6.1.1.4
]
Organism
dsq
Dichomitus squalens
Pathway
dsq00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DICSQDRAFT_138696
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dsq01007
]
DICSQDRAFT_138696
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dsq03016
]
DICSQDRAFT_138696
03029 Mitochondrial biogenesis [BR:
dsq03029
]
DICSQDRAFT_138696
Enzymes [BR:
dsq01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.4 leucine---tRNA ligase
DICSQDRAFT_138696
Amino acid related enzymes [BR:
dsq01007
]
Aminoacyl-tRNA synthetase
Class I (U)
DICSQDRAFT_138696
Transfer RNA biogenesis [BR:
dsq03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
DICSQDRAFT_138696
Prokaryotic type
DICSQDRAFT_138696
Mitochondrial biogenesis [BR:
dsq03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
DICSQDRAFT_138696
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
tRNA-synt_1g
Anticodon_1
tRNA-synt_1e
DUF1304
Motif
Other DBs
NCBI-GeneID:
18835768
NCBI-ProteinID:
XP_007368041
JGI:
138696
UniProt:
R7SU49
LinkDB
All DBs
Position
Unknown
AA seq
1088 aa
AA seq
DB search
MANASANTIELAQTGKRDELRELELKYQARWEKERLFEVEAPSPEELSGLTPAQIKEQYP
KWFGNFPYPYTNGSLHLGHAFTISKIEFAAGYHRMVGKRVLFPHGFHCTGMPIKAAADKI
EREIEMFGENFERFVPDEEPTPAAPATTSDGSAKAVDKGKKGKVAAKATGLQYQFQIMES
MGVPREEIKKFADPYYWLKYYPPICIEDNKLFGSRIDWRRSFITTVANPYYDAFVRWQTN
KLYKLGKIKFGERYTVYSPKDGQPCMDHDRSEGEALGPTEYTGIKMEVVSFPEAAEKMIR
EKVGSRKVFLVAATLRPETMYGQTNCFVGTQIKYGVFGINDKEAYVCTYRAARNMAFQGI
TAVRGEVNQLAEIEGSLLVGTKIKAPLSVNPEVYVLPMENVLPTKGTGVVTSVPSDSPDD
FQTLTDLRKKPEFYKVDPSWMQYDPVPVISTPTYGEMTAPAVIKQLKIQSQKDTKQLAEA
KEIAYKEGFYNGTMLVGEFKGLAVQEAKPRVREQLISSGLAFAYAEPEGLIISRSSDECV
IALMDQWYLDYGEPSWRAQAEKLVAKMETYNAETRNAFEGVLAWLNKWACARTYGLGSKI
PWDPTFLVESLSDSTIYMAYYTIAHHLHSKLDGSEPGDLGITADQMTDEVWDYVLNGGPF
PNPAPLPKEKADRLKHDFNYFYPFDVRSSGKDLIPNHLTFCVYIHAALFPEEKWPLSMRT
NGHLMVNGQKMSKSKGNSMTMRQCIEKFGADATRLCLADAGDGIEDANFDEKTANANILR
LHTLIAWCDEQIKNKGQLRTGEKNYHDLVFEHEVNDLNIKTKQFYADMTYKDALKYGFYE
LQSTRDWYREVTADVGMHADLVEWWIRTAALLALPVAPHFAEHVWSTILKEPKSVQLAQW
PAVTRPVDQTVLDSAVYMRGTIKTMRDAELSLLKKMNKGKQGQATYDPKRPRAVRIYVST
AFPEWQETCVQIVKDAYSPEHDKVDDAKVRELLTQRGLIKDKRAMPFVQAFKKRMQQFGT
QTAFNRTVPFSEVKILHEILPYLKRTLNLTDAEVLLVDDAKSKDLSTLTKGLVESAEPGN
PAFEYYNV
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgcctccgcgaacaccatcgagctcgcccagaccggcaaacgcgacgagctc
cgcgagctcgagctcaagtaccaagccaggtgggagaaggagcggctcttcgaggtcgag
gcaccgtccccggaggagctcagcggcctcaccccggcgcagatcaaggagcagtatccc
aagtggttcgggaacttcccctacccgtacacgaacggctctctccatctcggacacgcc
ttcaccatctcaaaaatcgagttcgcggcgggataccatcggatggtggggaagcgggtg
ttgtttccgcacgggttccactgtacgggcatgccgatcaaggctgcggcagacaaaatc
gaacgcgagatcgagatgttcggtgaaaactttgagcgcttcgtccccgacgaggagcct
acccccgccgcgcccgcgacgacgtcagatggctccgcgaaagccgttgacaaggggaag
aagggcaaggtggcggcgaaggcgaccgggctgcaataccagttccagatcatggagtcg
atgggcgtgcctcgggaggagatcaagaagtttgcggacccgtactactggttgaagtac
taccccccaatctgcatcgaagacaacaagctgttcgggtcgaggatagactggcgccgg
tcattcatcacgactgtcgcgaacccctactacgatgcgttcgtccggtggcagaccaac
aagctgtataagctgggaaagatcaagttcggcgagcgatacactgtctacagtccaaaa
gatggccagccgtgtatggaccacgatcgctccgagggcgaggccctgggaccgacggag
tacacgggcatcaagatggaggtcgtcagttttcccgaggctgctgagaagatgatccgg
gagaaggtcgggagccggaaggtgttcttggtcgccgctaccctgagaccggagacgatg
tacggccagacgaactgcttcgtcggcacgcagatcaagtacggcgttttcggcatcaac
gacaaggaggcgtacgtctgcacctaccgcgcggcgcgcaacatggccttccagggtatc
accgccgtccgcggcgaggtcaaccagctcgcggagatcgagggctcgctgctcgtcggc
acgaaaatcaaggcgcccctctccgtcaacccggaagtgtacgtgctccccatggagaac
gtcctcccgacgaagggcacgggtgtcgtcacctccgtcccctccgactccccggacgac
ttccagacgctgaccgacctccgcaaaaagcctgaattctacaaggtcgatccctcctgg
atgcagtatgacccggtgccggtgatctcgacgccgacgtacggagagatgacggcgcca
gcggtgatcaagcagcttaagatccagagccagaaggacacgaagcagctcgcggaggcg
aaggagatcgcgtacaaggagggcttctacaacgggacgatgctggtgggcgagttcaag
ggcctagcggtgcaggaggcgaagccgcgggtgcgcgagcagctgatctcgtctgggttg
gcgttcgcgtacgcggagcccgaggggctgatcatctcgcggagctcggacgagtgtgtg
atcgcgctgatggaccagtggtacttggactacggcgagccttcgtggagggcgcaggct
gagaagctcgttgcgaagatggagacctataatgccgagacccgcaacgcgttcgagggc
gtcctggcttggctgaacaagtgggcatgcgcgcgtacgtacggtctcggctcgaagatt
ccctgggaccccaccttcttggttgagagtctgagcgactcgacgatctacatggcgtac
tacaccatcgcccaccatctgcacagcaagctcgacggcagcgaacccggtgacctcggc
atcaccgccgaccaaatgactgacgaggtctgggactacgttctcaatggcgggcccttc
cccaaccccgcgcccttgcccaaggagaaggcggaccggcttaagcacgacttcaactac
ttctatcccttcgacgtgcgctcgtcaggcaaggacctgatcccgaatcacctcacgttc
tgcgtgtacatccacgcggcgctcttccccgaggagaagtggccgctgagcatgcgcacg
aacggtcacctgatggtcaacgggcagaagatgtcgaagagcaaaggcaactcgatgacg
atgcgccaatgtatcgagaagttcggcgcggacgcgacgcggctgtgcttggcggacgcg
ggcgatggcattgaggacgcgaactttgacgagaagacggcgaacgcgaacatcttgcgt
ctgcatacgctcatcgcgtggtgtgatgaacaaatcaagaacaagggtcagctgcgcacg
ggcgagaagaattaccacgacctggtcttcgagcatgaggtcaacgacctgaacatcaag
actaagcagttctatgccgacatgacctacaaggacgccttgaaatatggcttctatgag
ctccagtcaacacgcgattggtaccgtgaggtcactgccgacgtcggtatgcatgccgac
cttgtcgagtggtggatccgtaccgccgctcttctcgccctccccgtggcgccccacttc
gccgaacacgtctggagcacgattctaaaagagcccaagtccgtccaacttgcgcagtgg
ccagcagtcacgcgccccgtcgaccagaccgtcctcgactcggccgtgtacatgcgcgga
acgatcaagacgatgcgcgacgcggagctctcgctgctcaagaagatgaacaagggcaag
cagggccaggcgacgtacgaccccaagcggccccgcgcggtccgcatctacgtctcaacg
gcgttccccgagtggcaggagacgtgcgtgcagatcgtcaaggacgcgtactcgcccgag
catgacaaggtcgacgatgccaaggtgcgcgagcttctgacacaacgcggcttgatcaag
gacaagcgcgcgatgccgttcgtgcaagcgttcaagaaacgcatgcaacaattcggcacg
cagaccgccttcaaccgcacggtgccgttctcggaggtcaagatccttcacgagatcttg
ccgtacctgaagcggacattgaatctgaccgacgcggaggtcctcttggtagacgacgcg
aagtcaaaagacctgtcaaccctcacaaaggggctcgtcgagagcgcagaacccgggaac
ccagctttcgaatactacaacgtatag
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integrated database retrieval system
