KEGG   Dichomitus squalens: DICSQDRAFT_81457Help
Entry
DICSQDRAFT_81457  CDS       T03133                                 

Definition
(RefSeq) DNA ligase 4
  KO
K10777  
DNA ligase 4 [EC:6.5.1.1]
Organism
dsq  Dichomitus squalens
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:dsq00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    DICSQDRAFT_81457
Enzymes [BR:dsq01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     DICSQDRAFT_81457
DNA repair and recombination proteins [BR:dsq03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     DICSQDRAFT_81457
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
JGI: 
LinkDB All DBs
Position
Unknown
AA seq 1025 aa AA seqDB search
MQPTPAPSSPGRSSPPRESSPPVAAAPGHPLIYPAPPQNNGSAPFHVLAALFDRLQNERK
PDKRRKLLSSWFNHWRKEIGPDLYPVLRLILPQKDRERAVYGLKEKNLARAYIKLIPLGK
RDPDAVRLLNWKKPTERGKSSGDFPTVLYEVVNKRSSVVEGSLTVDDVNEYLDQIAQNMG
KSDIQSKILQRIYNRSTPEEQRWIVRIILKDMIISVKENTVFGVFHPDAHDLFNTCSDLK
KVAWELSDPFRRLKDEDKTVQLFRAFAPMLCKRPNKKIEESVKGMQGRTFIIEEKLDGER
IQLHKRGNEYFYCSRKGKDYTYLYGKHVGTGSLTPYIDAAFDERVDEIILDGEMLVWDPV
SGRNLPFGSLKTAALDRSKKEHNPRPCFKVFDLLYLNGMSLLHRSTKFRKRNLRSCLKEV
PGRIEFITEYEGKTAKDIRIRMDDIVANRGEGLVLKHPDAEYVLNGRNKDWIKVKPEYMD
NMGETVDLLVVAGNYGTGRRSGGVSTLICAVLDDRRSNDDDEPKYCSFVRIGTGLSYADY
IWIRQKPWKVWGVNGPSWLHVSRKGHEDKGDCYLEPEDSFILKIKGAEIISSDLYSLGFT
MRFPRALRIRDDLSIADCMTATAVLENIRSEKKRKMEDDDDKPKKKAKKTAKKPTIMPEY
QGTNLKDVPVESELFDGYKFMVSSDPKSRTGSADKSALQQMIHAHGGKVVHIPRDDPNLF
VVYGGQTTPYDLKLIINKDVCDIIRPQWILDCVAKETIVPLTKKYFFHATTARKETEDYS
ADNSDTEEESPPPSSPSASISKTPEELAHEKQVESQIDPSMAEWFDIGAKSKATQSREED
SGSETEPEPDEEEPDSENEDVRPEPEVGFDEEDGDWEQIEREGDMKPTQSEKASGKGKEE
EYVRMGEDEDAIHYDQDKIFKHLCFYVDSPSKARELGLSVKAKNEADVEKRLKEIVKLIE
SNGGRVTDVDDPKLTHVVLDKRDISRRQELIKRTSKPKRRHLVIAEFIEACLEEETLLDE
DEFMP
NT seq 3078 nt NT seq  +upstreamnt  +downstreamnt
atgcagccaacgccggctccgtcatcccccggtaggagctccccgccgcgcgagtcgtcg
ccaccggtggccgcggcgccaggccatccactcatatatcccgcaccgccgcaaaacaac
gggagcgcgccgttccatgtgctagcggcactttttgacagattgcagaatgaaagaaag
cctgacaaacgtcgcaaattgctctcgtcgtggttcaaccattggcggaaagaaataggt
cccgatctataccctgtcttgagactcatactgccgcagaaagaccgcgagcgagctgta
tacggtctgaaggagaagaaccttgcaagggcctatatcaagctcatccctttgggcaaa
cgtgatccggatgcggtgcgactgctcaactggaagaagcccactgaaagaggcaaatcg
tcgggcgactttcctacagtgctctatgaggtcgtgaacaagcgatcttccgtcgtagag
ggatctctgaccgtcgacgatgtcaatgaatacctggatcagatcgcgcaaaacatgggc
aagtctgatattcagtccaagatcctgcagcgcatttacaacagatcgactcccgaggag
caacggtggatcgtgcgcatcattttgaaagatatgatcatctccgtgaaggagaacact
gtcttcggtgtcttccatcccgacgctcacgacctgttcaacacctgctctgacctgaag
aaggtagcttgggagctatccgaccctttccgacgactgaaggatgaggacaagactgtc
cagctattccgtgcttttgcccctatgctctgcaagcgccccaacaagaagatcgaagag
tctgtcaaggggatgcaaggtcgaacctttatcatagaggagaagctcgacggggagcgt
atccagttgcataaacggggcaacgagtacttctactgctcacgaaagggcaaagactat
acgtacttgtatggcaaacacgtcggtacaggcagcttgaccccgtatatcgacgcagca
ttcgacgaacgggtcgacgagattatcctggacggcgagatgctcgtctgggatcccgtg
tcaggacgcaacttgccatttggaagcctcaaaaccgcggctctggataggtcaaagaag
gaacataacccacgcccctgcttcaaagtcttcgacctactctacctcaacggcatgtcg
ctgctccaccgatccacgaagttccgcaaacggaacctccggtcttgtcttaaggaggtg
cccgggcgcatcgagtttataacggaatacgaagggaagaccgcgaaggacatacgaatt
cgcatggatgacatcgttgccaaccgtggcgaagggttggtactcaagcatccggatgcg
gagtatgtgctcaacggaaggaacaaggattggatcaaagtgaagccagaatatatggat
aacatgggagaaacagtcgatcttcttgtcgtcgccgggaactatgggactggcagacga
tctggaggtgtctccaccctcatctgcgcagtcttggatgatcgacggtcgaacgacgac
gacgagccgaagtattgttcctttgtgcgcattggcacgggcctttcgtacgccgactac
atctggatccgccaaaagccttggaaggtatggggcgtcaatgggccttcatggctgcac
gtgtcaagaaagggacatgaggataaaggcgactgttatctcgaaccagaagactcgttc
atcctcaagatcaagggggcggaaatcatcagctccgacttatactcattggggttcacc
atgcgcttcccgcgtgcactccggatccgagatgatttgagcatcgcggactgcatgacc
gccactgctgtcctcgagaatattaggtccgagaagaagaggaagatggaggacgatgat
gacaagcccaagaagaaggcaaagaagacggccaagaagcctacgatcatgccggaatac
caagggacaaacctcaaggatgtaccagtagaatccgagttgttcgacggttacaagttc
atggtgtcctccgacccgaagtctagaaccggatctgcggacaagagtgctcttcagcag
atgatacatgctcatggcggcaaggtcgttcacatcccccgcgatgacccgaatctgttc
gtggtatatggcggccaaacaacgccatatgacctcaagctgatcatcaacaaggacgta
tgcgacatcatccggcctcagtggatcctggactgtgtggcaaaggagacgatcgtgcct
ttgacgaagaagtatttcttccacgcgacgacagctcgcaaggagaccgaagactacagc
gcggataacagcgataccgaggaagaatctcccccgccctcttctccatcagcatccata
agcaagactcctgaagaacttgctcatgagaagcaggtagagagccagatcgatccatca
atggcagagtggttcgatatcggagccaagtctaaggccacgcaatcacgggaggaggac
agcggcagcgagacggagcccgagccagacgaggaagagccggattcggagaacgaggat
gtgcgacctgaaccggaggtcggcttcgatgaggaagatggcgactgggagcaaatcgag
agggagggagacatgaagcctactcagagcgagaaggccagcgggaagggcaaggaggaa
gagtatgtccgcatgggagaagatgaagatgctattcattatgaccaggacaagatcttc
aagcatctgtgcttctatgttgactctcctagcaaggcccgagagctcggcttgtctgtc
aaagcgaagaacgaggcagacgtggagaagcgcctgaaagagatcgtgaaacttatcgag
agcaacggcggtcgcgttacagacgttgacgaccccaaattaactcatgtggtgcttgac
aagcgtgacatcagtcgtaggcaagagctcatcaagcgcacctccaagccgaagcgtagg
catctcgttatcgctgaattcattgaggcgtgcctcgaggaagaaacactattagatgaa
gatgagttcatgccttga

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