Desulfobacula toluolica: TOL2_C41900
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Entry
TOL2_C41900 CDS
T02268
Symbol
recC
Name
(GenBank) RecC: exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
dto
Desulfobacula toluolica
Pathway
dto03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TOL2_C41900 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dto03400
]
TOL2_C41900 (recC)
Enzymes [BR:
dto01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
TOL2_C41900 (recC)
DNA repair and recombination proteins [BR:
dto03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TOL2_C41900 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Imm61
Motif
Other DBs
NCBI-ProteinID:
CCK82346
UniProt:
K0NL93
LinkDB
All DBs
Position
complement(4957166..4960672)
Genome browser
AA seq
1168 aa
AA seq
DB search
MENHKINSVQEIVPGLSIIHSNHLEDLRKVAAGWIKAHPLKVLETEQFIVQSNGMAQWLK
LALADDDGCGISAGLEVHLPGRYVWTAYRSVLGNDSIPVDSPYDRDRLVWRFFRLLPLLS
EEEAFLPLNRFLEHDEDQRKQYQLACHLADLYDQYQVYRADWLEDWSKGKDRLKTGRGEP
VELPLEHKWQAQLWRRLKNDIPTQFQEIGRADLHQRFLRQIAQMDHRPDTLPPRVMVFGI
SSLPQQVLETLHAVSRLCQVLLFVHNPCRHFWADIIEDRDLLRIEHARHRSKDSMPDPLD
PELLHQHANPLLAAWGKQGRDYIGLLYGYDEPDTYQQQFAQIDLFDDFIAQGTNGSLLQQ
VQQAILDLVPLPGEKEDKQQVTEDDLSISFQLAHSRQREVEILQDQLLHCFETIECLNPR
DVIVMTPDIEAYAPHIEAVFGNLAFHDSRFIPFTIADKPGRESVPLLKALEKLLHLPDSR
MAVSDIMDLLEVPAFRNRFGVKEADLPKLHQWIKGAGISWGLNPDQRTGFGLPPGLEQNT
WEFGLKRMLLGYAVGKAQEWNGIEPYDEVGGLEAALIGPLAAVIEQMESLWKILSRPGSP
EQWCLRIRSLAKNCFLPEESRDRLILNRLDEVLDNWLDACTQAELDRELTLAVVRDFFLG
MIIQSSISQRFLAGMVNFGTLMPMRAIPFKVVCLLGMNDKEFPRSHPPLDFDLMAQKGLY
RPGDRSRREDDRYLFLEALLSAREKFYISYVGRDVRDNSPRMPSVLVGQLRDYISAGWSL
EDCGDDDNEKNTLIDQLTCIHPLQPFGSAYFLKTQPRLFTYAHEWRSSLEVKESGIIEDS
LEKTLFDEILNLGSLIRFVKNPVKYFFNQSLSIYFDQIRVVSQDQEPFVLDALAPFGLGN
QLLEAGLSADPAQMQTAVLKEAERLTRTGELPMAGFGLLAAQQLSEPVMLMLKHHQTLLS
KWPLKCDPMEISIPLDPERSLLTALDDWLDRLYQTDSPDALPRFGRWEFYPKSILDKKGN
VLRIYCLIPLWIRHVSGCAQGINLASFLVAPDGIASLDPLEPAKAMEILMTLIEQFWTGL
TRPLAVTARTGIAYVDALMTKDAQTAKSKALKTYEGDGFQSQGELGYDPYLQRAFPDFDA
LWQARDNSFERLCQTLYKPLVNAVRKEA
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atggagaaccacaagatcaacagcgtacaagaaattgtccccggcctttccattatccat
tccaaccacctggaagacttgagaaaagtggctgcaggctggatcaaggcccatcccctg
aaggtgctggaaaccgagcagttcatcgttcagagcaacggcatggcccagtggctcaag
cttgccctggctgatgacgacgggtgcggtatcagtgccgggcttgaagttcatctgccc
ggacgctacgtctggaccgcctatcgttccgtactgggaaatgacagtatccccgtggac
tctccctatgacagggatcggctggtttggcggtttttcaggctcttgcccctgctgtcg
gaggaggaggcgtttctacccctgaaccggttccttgaacacgatgaggaccagcgcaag
caataccagctggcctgtcacctggcagacctctatgatcagtatcaggtctaccgggcc
gactggttagaagactggtcaaaaggcaaagatcggctcaaaaccggcaggggtgaaccc
gttgaattgcccctggaacacaaatggcaggcccaattgtggcgcaggctgaaaaacgat
attccaacacaatttcaggagatcggtcgtgcagaccttcaccagcggtttctcaggcag
attgcccaaatggatcaccggcccgataccctgccgccccgggtaatggtatttgggatc
tcatcgttgccccaacaggtgctggaaaccctgcatgccgtgtcccgcctttgccaggtg
ctgctgtttgtacacaatccctgccgccacttctgggcagatatcattgaagaccgtgac
ctgttgcgcatcgaacatgcccgtcatcgcagcaaggattccatgccggaccctcttgat
ccggaactgctgcaccagcacgccaacccgctgcttgcggcatggggcaaacagggcagg
gattacatcggccttctttacggatatgacgagcctgatacctatcaacagcagtttgcc
cagatagacctgtttgatgattttattgcgcagggcacaaacggcagtctgctgcaacag
gttcagcaggcgatcctcgaccttgttcctttgcccggtgaaaaagaagacaaacaacag
gtgacagaagatgatctgtccataagtttccagctggcccacagccgccagcgggaggtg
gagatccttcaggaccagcttcttcattgttttgaaaccattgaatgcttaaatcccagg
gatgtcattgtgatgactccggatatcgaggcctatgcacctcatatcgaagctgtgttc
ggcaaccttgcgtttcatgattcacggtttattccctttaccattgcagacaaacccggc
agggaaagcgttcctttgctcaaggcccttgaaaaacttctgcacctgcccgattcgcgc
atggctgtcagcgacatcatggacctgctggaagttccggcctttcgaaacaggttcggt
gttaaagaagccgacctgccaaagcttcaccaatggatcaagggcgcaggcataagctgg
ggattgaacccggatcagcgcaccggttttgggctgccgcccggtcttgaacagaatacc
tgggagtttggcctgaaaagaatgctgctgggctatgccgtgggtaaggcccaggaatgg
aacggtattgaaccctatgatgaagtgggggggcttgaagccgccctgatcggccccctg
gcagccgtgatcgagcagatggaaagcctatggaaaatattgagcaggccggggtctcct
gaacaatggtgtttgcgaatccgatctcttgcaaaaaactgttttctgcctgaagaaagc
cgggaccggctgattctcaaccgcctggacgaggtgctggacaactggctcgacgcctgt
acccaggccgaacttgacagggagctgacccttgccgttgtacgggatttttttcttgga
atgataatacaatccagtatatcccagcggtttcttgccgggatggtcaatttcggcacc
ctcatgcccatgcgtgccattccctttaaggtggtgtgccttttgggaatgaacgacaaa
gaatttccaaggagccatccgccgcttgatttcgaccttatggcccaaaaaggtctttat
cgaccgggagacaggtccaggcgggaggatgaccgctatctttttctggaagccctgctc
tcggcccgggaaaaattttatatcagttatgtgggaagagatgtccgggataacagcccc
cgcatgccgtcggttctggtgggccagcttcgtgactatataagcgcaggctggagcctt
gaagattgtggggatgacgacaatgaaaaaaacacacttatagatcagcttacctgtatt
catccccttcagccttttggcagtgcatattttctcaaaacgcaacccaggctttttacc
tatgcccatgagtggcgaagttcccttgaagttaaggaatccgggatcattgaagattcc
ctggagaagaccttgtttgatgaaattcttaaccttggttcgctgatcaggtttgtgaaa
aatcccgtgaaatattttttcaaccagagcctttccatatactttgatcaaatccgtgtt
gtcagtcaagaccaggagccctttgtccttgacgcccttgcacctttcgggcttggcaac
cagcttctggaagcagggctttcagcagatcctgcacagatgcaaaccgctgttttaaaa
gaagccgagcgtctgacccgcacaggagaactgcccatggcgggattcggcctgctggct
gcacaacagctttcagaaccggttatgctaatgctcaagcaccaccagaccctcttgtcc
aagtggccgctaaagtgtgaccccatggaaatatcgattccccttgatcctgaacggtct
ttgttaactgctctggacgactggctggatcggctttatcaaacagattccccggacgct
ttgccacgtttcgggcggtgggaattttatcccaaatccattctggacaaaaagggaaat
gttttgcggatttactgcctgattcccctctggatacggcatgtttcaggctgcgcccag
ggcataaatcttgccagtttccttgttgccccggacgggattgcaagccttgatcccctt
gagcctgcaaaagccatggaaattctcatgacccttattgaacagttttggacagggctt
actcgcccgcttgccgtgacggccaggacgggaattgcctatgttgacgctctgatgaca
aaagatgctcaaacagcaaagagcaaggcattaaaaacttatgaaggagacggcttccaa
tcacaaggagagcttggctatgatccttaccttcaacgagcctttcctgattttgacgca
ctgtggcaggcccgggacaacagctttgaacggctttgtcaaactctttataaacctttg
gtcaatgccgttagaaaggaggcatga
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