Dyella thiooxydans: ATSB10_25220
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Entry
ATSB10_25220 CDS
T04308
Name
(GenBank) hypothetical protein
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
dtx
Dyella thiooxydans
Pathway
dtx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dtx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ATSB10_25220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dtx03400
]
ATSB10_25220
Enzymes [BR:
dtx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ATSB10_25220
DNA repair and recombination proteins [BR:
dtx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ATSB10_25220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
PriA_CRR
AAA_30
zinc-ribbons_6
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AND69976
UniProt:
A0A160N269
LinkDB
All DBs
Position
2697447..2699624
Genome browser
AA seq
725 aa
AA seq
DB search
MSTAVRVALPVPLPTLFDYLPPADGRVMAGQRVLVPFGRGRQVGIVVDAAVTSERDDSRL
KPVLQVLDDEPLLDGELLRTLAWAADYWLGAPGEAFAQALPLALREPRPLPEIAEEYWQL
TPAGQQEHAAGRRRGGSRDLLGLLIKGPRHADELTASLPAWRTAARRLAAAHLVERCPPP
AAPPRRQPPTSLPLSAEQRDAVTAVGEAFGRFQPFLLDGVTGSGKTEVYLALIEQALAEG
RQSLLLVPEIGLAPQTLRRLRERLGVPVEVLHSNLAEGDRARAWLRARSGEAKVVLGTRS
AVFAPLPRAGLILVDEEHDASYKQQEGFRYHARDLALVRARELGVPIVLGSATPSLETLA
NAASGRFRTLRLRTRPGAARPTPQVQIVDVRAQYLDHGLSPALLAAVSETVARGEQVLVF
RNRRGYAPVLLCHACGWHADCPRCERPMTLHAGQRQLRCHHCDRHAPVPSHCPACGAGAL
WPQGHGTERLEEALGALFPEVPVRRIDRETTRRRDAFEHLLDELRQDGPAILVGTQMLAK
GHDLPRLTLVAIVSIDEGLHSVDFRAGERLAQLLVQVAGRAGRADRTGRVLLQTHHPEHP
LLRTLLASGYGTAAETLLAEREAVQLPPCSHQILLRADAHHRADVDTFLAAAAAALPNDP
EVQLAGPMPAPMPLRAGRHRGQLLLESSSRARLHSVARPWRLQLGALPSSRRVRWSLDVD
PIDLY
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgccgtccgcgtcgccctgcccgtcccgctcccgacccttttcgactatctg
ccaccggccgacggccgggtcatggctggccagcgcgtgctggtgccgttcgggcggggg
cgccaggtgggtatcgtggtcgacgcggccgtgacatcggaacgggatgactcccggcta
aagccggtgctgcaagtgctggatgacgagccgctgctggacggcgagctgctgcgcacg
ctggcctgggccgccgattactggctgggtgcaccgggggaagcgttcgcccaggcgttg
ccactggcgctgcgcgagccgcggccgctgccggagatcgccgaggaatactggcagctc
acgccggccgggcaacaggagcacgccgccggccgccggcgaggcggcagcagggacctg
ctaggcctgctgatcaaagggccgcgccacgcggacgagctgaccgcctcgctgcctgcg
tggcggaccgcggcacgtcggctggccgccgcccacctggtcgagcgctgccccccgcca
gctgcaccaccccgacgacaaccgccaacatccctgccgctgagcgcggagcagcgcgat
gcggtgactgccgtcggtgaggccttcggacgtttccagccgttcctcctcgatggcgtc
accggcagcggcaagaccgaggtgtacctggcattgatcgaacaggcactcgccgaaggc
cggcagagcctgctgctggtgccggagatcggcctggcgccgcagaccctgcgccggctg
cgcgagcgcctgggcgtgccggtcgaggtgctgcactcgaacctggccgagggcgatcgg
gcgcgggcgtggctgcgcgcgcgcagcggcgaggccaaggtggtgctgggcacccgttcg
gcggtgttcgctccgctgccgcgcgccggcctgatcctggtcgacgaggaacatgacgcc
tcctacaagcagcaggaaggcttccgttaccatgcgcgtgacctggcattggtccgtgcc
cgagagctaggcgtgccgatcgtgctgggcagcgccacgccctcgctggagacgctggcc
aacgccgccagcgggcgcttccggacgctgcgtcttcgtacccgacctggcgccgcgcgg
cccacgccgcaggtgcagatcgtcgacgtgcgcgcgcagtatctggaccatgggctgtcg
cccgcgttgctcgctgcggtgagcgagacggtggcacggggcgagcaagtgctggtattc
cgcaatcgtcgcggctatgcaccggtcctcctctgtcacgcctgtggctggcacgccgac
tgcccgcgctgcgaacgcccgatgacactgcatgccgggcaacggcagttgcgatgtcac
cattgcgaccggcacgcgccagtgccgtcgcactgccccgcctgtggcgccggtgcgctc
tggcctcagggccacggcaccgagcgactggaggaggcgctcggcgcgctgttccccgag
gtgccggtcaggcgcatcgaccgggagaccacccgccgccgcgatgccttcgagcatctg
ctggacgagctgcggcaggacggcccggcgatcctggtcggtacgcagatgctggccaag
gggcacgaccttccccggctgacgctggtcgccatcgtcagcatcgacgaagggttgcac
agcgtggatttccgggccggcgaacggctcgcccaactgctcgtgcaggtcgccgggcgg
gcggggcgggccgatcgcaccggtcgcgtgctgctgcagacccatcatcccgagcatccg
ttgctgcgcaccctgctcgcctcgggctacggaacggcggcggaaaccctgctggccgag
cgcgaggcggtgcaactgcctccttgcagccatcagatcctgctccgcgccgacgcgcac
catcgcgccgacgtggacaccttcctggccgctgcggccgcggcgctgccgaacgatccg
gaagtccaactggccgggccgatgccggcgccgatgccgttgcgtgctggccggcatcgc
ggccaattgctgctggaatcctccagtcgtgcccggctgcattcggtcgcacggccgtgg
cggctccagctcggcgccctgccgtcatcgcggcgggtacgctggtcgctggacgtcgac
cccatcgacctctactga
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integrated database retrieval system
