Dickeya zeae: W909_10010
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Entry
W909_10010 CDS
T03567
Name
(GenBank) RNA helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
3.6.4.13
]
Organism
dzc
Dickeya zeae
Brite
KEGG Orthology (KO) [BR:
dzc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dzc03009
]
W909_10010
Ribosome biogenesis [BR:
dzc03009
]
Prokaryotic type
rRNA helicases
W909_10010
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Helicase_C_2
CMS1
CAAP1
AAA_19
YlmH_RBD
Motif
Other DBs
NCBI-ProteinID:
AJC66381
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All DBs
Position
complement(2211157..2212530)
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AA seq
457 aa
AA seq
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MTSFAELNALSAEQLTTLNELGYLSMTPIQAAALPAALAGKDVRAQAKTGSGKTAAFGLG
LLQHLDAGQFNTQSLVLCPTRELADQVANELRRLARGMPNIKVLVLCGGVPFSIQRDSLI
HAPHIIVATPGRLLDHLKKETVSLDALQTLVLDEADRMLDMGFADAIDEVIHHAPVERQT
LLFSATWPEAIAAISRRIQRDPVVIEIDTVDELPAVEQQFYEVSRNGKLDLLQKLLSREQ
PASCVVFCNTKKDCQAVYDALTHSNQSVLALHGDMEQRDRDQTLVRFANGSSRVLVATDV
AARGLDIKALEMVINYELSWDPEVHVHRIGRTARAGEQGLAISLCAPEEAQRANALEEML
KMKLTWHPLPSGLRITPLDAAMATLCIDGGKKAKMRPGDILGALTGDMGLDGADIGKITI
HPMHAYVAVRQSLARQVWKQLQQGKIKGKAVKVRLLK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
gtgacctcatttgctgaactgaacgcgctttctgcggaacaactcaccaccttaaacgaa
ctggggtatttgtccatgaccccgattcaggctgccgcattaccggctgccctcgccggt
aaagatgtccgggcgcaggcgaaaaccggcagcggtaaaacggcggcttttgggctgggc
ctgctgcagcatttggatgccgggcagtttaatacacagtcgttggtgctgtgcccaacc
cgcgaactggctgatcaggtcgccaatgagctgcgtcgtctggctcgtggtatgccgaac
atcaaagtgttggtgttgtgcggcggtgtaccgtttagcatccagcgtgactcgctgatt
catgctccccatattattgtcgccacaccgggccgactgttggatcacctgaaaaaagag
accgtcagcctcgatgcattgcagacattggtgctggatgaagcggatcgcatgctcgat
atggggtttgccgatgccatcgacgaggtgattcaccacgcaccggtcgaacgccagaca
ctgctgttttccgccacctggccggaggcgattgccgccatcagccgtcgtattcagcgt
gatccggtggtcattgaaattgacacggtggatgaattgccagcggtcgagcagcaattc
tatgaggtgtcgcgcaacggcaagctcgatctgctgcaaaagttgctgagccgtgaacag
cccgcgtcctgcgtcgtgttttgtaataccaagaaagattgtcaggcggtatacgatgcg
ctgacccacagtaaccaaagtgtactggcgctgcacggcgacatggagcagcgcgatcgc
gaccagacgttggtgcgttttgccaacggcagcagtcgtgtgctggtggcaaccgacgtt
gctgcacgcgggctggatatcaaggcactggagatggtgattaactacgaactgtcgtgg
gatcctgaagtgcatgtccatcgtatcggccgtaccgcccgtgccggtgaacagggtctt
gccatcagcctgtgtgcaccggaagaagcacagcgagcgaatgcgctggaagagatgctg
aagatgaagctgacctggcatccattgcccagtgggttgcgtatcacgccactggacgcg
gcgatggcaacgctgtgtattgatggtggcaaaaaggccaaaatgcgccccggcgatatt
ctgggcgcgctaaccggcgacatggggcttgatggtgcggatatcggcaagattactatc
cacccgatgcacgcttatgtggccgtcaggcagtcgctggcgcgtcaggtttggaagcaa
ctacaacaaggcaaaattaaagggaaagcagtaaaggtcaggctgctaaagtga
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