Escherichia albertii: EAKF1_ch3333c
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Entry
EAKF1_ch3333c CDS
T03986
Symbol
csiR
Name
(GenBank) DNA-binding transcriptional regulator CsiR
KO
K15735
GntR family transcriptional regulator, carbon starvation induced regulator
Organism
eal
Escherichia albertii
Brite
KEGG Orthology (KO) [BR:
eal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eal03000
]
EAKF1_ch3333c (csiR)
Transcription factors [BR:
eal03000
]
Prokaryotic type
Helix-turn-helix
GntR family
EAKF1_ch3333c (csiR)
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Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
Pox_A32
HTH_41
Motif
Other DBs
NCBI-ProteinID:
AHE61183
LinkDB
All DBs
Position
complement(3494651..3495310)
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AA seq
219 aa
AA seq
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MTITSLDGYRWLKNDIIRGNFQPDEKLRMSLLTSRYALGVGPLREALSQLVAERLVTVVN
QKGYRVAPMSEQELLDIFDARANMEAMLVSLAIARGGDEWEADVLAKAHLLSKLAACDAS
EKMLDEWDLRHQAFHTAIVAGCGSHYLLQMRERLFDLAARYRFIWLRRTVLSMEMLEDKH
DQHQALTEAVLARDVARASELMRQHLLTPIPIIRQAMAG
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgaccattacgtccctggatggctatcgctggctgaagaacgatattattcgcggtaat
tttcaaccggatgaaaaattacggatgagtttgctgacctcgcgttatgcactcggcgtc
gggccgttgcgggaagcgctttcacaactggtggcggaacgactggtcacggtggtaaac
caaaaagggtatcgggtggcgcctatgtcagagcaggagctgctcgatattttcgacgcc
cgcgccaatatggaagcgatgctggtcagtctggcgattgcccgcggtggcgatgaatgg
gaggcagacgttcttgcgaaggcacatctgctcagtaagctcgcggcgtgtgacgccagt
gagaaaatgcttgatgagtgggatctgcgtcatcaggcttttcacactgcaattgtggcg
ggctgtggttctcactatttgctgcaaatgcgtgaacggttgtttgatctggcggcgcgc
tatcgatttatctggctgcgacgaacagtgctttccatggaaatgctggaagataaacac
gatcagcaccaggctctgaccgaggcagtgctggcgcgagatgtcgcgcgcgccagtgag
ttaatgcgtcaacatttgctgacgccgatcccgattatccggcaggcaatggcgggataa
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